| Tag | Content |
|---|
EnhancerAtlas ID | HS101-01259 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr1:40523830-40525000 |
Target genes | | Number: 18 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr1:40524181-40524196 | GAGGTCAAGAGTTCA | + | 7.64 | | RARA | MA0729.1 | chr1:40524181-40524199 | GAGGTCAAGAGTTCAAGA | + | 6.45 | | Stat6 | MA0520.1 | chr1:40524887-40524902 | CTGTTCCTGAGAATT | + | 6.35 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_04621 | chr1:40522034-40524441 | Brain_Anterior_Caudate | | SE_09462 | chr1:40520026-40528261 | CD14 | | SE_11290 | chr1:40512290-40537565 | CD20 | | SE_13580 | chr1:40520109-40526931 | CD34_Primary_RO01536 | | SE_14500 | chr1:40519247-40528352 | CD4_Memory_Primary_7pool | | SE_17728 | chr1:40519508-40528705 | CD4p_CD25-_CD45RAp_Naive | | SE_18663 | chr1:40520031-40528361 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_20876 | chr1:40520328-40528166 | CD8_Memory_7pool | | SE_22570 | chr1:40519992-40531995 | CD8_primiary | | SE_26225 | chr1:40524410-40526945 | Duodenum_Smooth_Muscle | | SE_39994 | chr1:40521759-40526762 | K562 | | SE_52954 | chr1:40523852-40526719 | Small_Intestine | | SE_53653 | chr1:40523748-40526668 | Spleen | | SE_60101 | chr1:40499989-40553062 | Ly4 | | SE_62827 | chr1:40499695-40532104 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I040055 | chr1 | 40521362 | 40527365 |
|
Enhancer Sequence | AGTACTTGTG AAAGATCTAT AACAAATTCT TTTGGATGTG TCTAGTGTCC TTCCCTACTG 60
CATGTCCAGA TCTTTCTCAT CTTCATTTGA AGGCTGGCTC AAATGGCAGC TTCTCCATCA 120
TATCCTTATC TGATCCTTCC AGCTGATATA TTACTCCCCT CTTTGAAATC TCATGCCTCT 180
CTATCAGCAA CTTTCTTATG TCACCTTAAC ATTTTTTTCT ATTTGTTTCA TAGTTGTTAG 240
TGCATATGTT AAGTCTCCCC ATTAGACTAT AAATTACTGA GGGCAGGCCG GGCACAGTGG 300
CTCACGCCTG TAATCCTAGC ACTTTGGGAG GCCAAGGCGG GTGGATTACT TGAGGTCAAG 360
AGTTCAAGAC CATCCTAGCC AACACAGTGA AACCCTGTCG CTACTAAAAC TACAAAAAAT 420
TAGCTGGGCA TGGTGGCGCA CACCTATAAC CCTAGCTACT TGGGAGGCAG GAGAATCCCT 480
TGAACCCAAC AGGGTGGAGC TTGCAGTGAG CTGAGATCCT GCCACTGCAC TCCAGCCTGG 540
GTGACATTGT AAGACTTTGT CTGAAAAAAA AAAAATTATT GAGGGAAGAG TAAACATCCT 600
ATTCATCTTG GTTTGGGATA TTTCACATGC AGGCAGCAGG ATGTTGTAGG AAAAAAACAC 660
ACTGAACTTA GAACCAGAAG GATCAGATAA GGATATGATG GAGTACTGGC TTCTCTATTC 720
ACTGGCCGTG TGACTAGACA AGTCATTTAG CTTCACTGAA ACTAAGTTTT CTATCTCTAA 780
GCGTGTAGTA ATCATCCTTC TATTCCTGAA TAGTTGTCGG GAGGCTCAAA CTGAGATAAT 840
GTATGTGACT ATCCTTTGCA AATTCTAACT TTCTACACAC AGTATCATAG TAAATATTGA 900
GTATTTGAAT GAGTAAGCAT TTACTTTAGT GAACACCTTT TCCTGAGCAG TTCTCTTGCT 960
TAATGAGGTC TTTTGATTTT GTAAATATGC TACTTTTTTA TCTGATATTT TTGTATTGTT 1020
CCATTTTGCA GATGATATCT AATTTTATTA AATTATTCTG TTCCTGAGAA TTGGCATCCT 1080
CTTCATCCAC CTGGGGATGA CCAGGAATTT TCTGTTTTTT TCTCTGTAGG TGCTATTTAA 1140
TATTTAAATA ACAAATGACA TTTGATCTGT 1170
|
