EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-01228

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:39433990-39436000

Target genes

Number: 10
Name	Ensembl ID

RP11	ENSG00000215895
RRAGC	ENSG00000116954
RP5	ENSG00000228436
MYCBP	ENSG00000214114
RHBDL2	ENSG00000158315
AKIRIN1	ENSG00000174574
NDUFS5	ENSG00000168653
MACF1	ENSG00000127603
KIAA0754	ENSG00000255103
PABPC4	ENSG00000090621

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GSC	MA0648.1	chr1:39434951-39434961	GGGGATTAGC	-	6.02
KLF4	MA0039.3	chr1:39435325-39435336	CCACACCCTGT	+	6.14
Nr2f6(var.2)	MA0728.1	chr1:39435765-39435780	TGAACTCCTGACCTC	-	6.22

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I038969

chr1

39434881

39435030

Enhancer Sequence

TTATGGAGTC TCTCTCTGTT GCCCAGGCTG GAGTGCAGTG CTGCCAGCTC GGCTCACTGC 60
AACCTCCACC TCCCAGGTTC AAGCGATTCT CCTGCCTCAG CCTCCTGAGT AGCTGGGATT 120
ACAGGTGCCT GCCACCATAC CCAGATAATT TTTCTATTTT TTTTAGTAGA GCTGGGGTTT 180
CACCATATTG GCCAGGCTGG TCTCCAACTC CTGAACTTGT GATCCACCTG CCTCGGCCTC 240
CCAAAGTGCT GGGGTTACAG GCGTGAGCCA CCGTGCCCGG CCTTCTATTT CTTTCTCATT 300
GTCTAGCACT GGTTCAGAAG CACTCATCTC CATCAAATCT CCTGTTAATT CCTCTGGTAT 360
GGTGTCTATT AGCTTTTGAA TTTCTCCAAG ATCTATATCT TGGAATCCTT TATGTTTCAC 420
CTTTTTTGCC ATATGCACAA TTTCTTTCAT TATTTCCTTG ATTGTTTCTG TTATAAATCC 480
TGTAAAGTCA TGTAGAACAT CTTGACACAA TTTTTTTCTA GCAGGAATTT ATTGTTTCAG 540
GCCTGATGGC TTTCATGTTT TTTTTCTGTA ATAACGATGA TATCTTCAAT GGTGGGATCC 600
TTCCAGACTT TCATGATGTT CTCTCTAGCC GTGTTCTCTT CCACGGCATT GACAATACTT 660
TCCATAGAGT ACTGCTTGTA ATGACCCTTC AGGGTCCTTA TGACCTCTTA TCTAAAAGCT 720
GAATTACGAC ATTATGCTTG AGGGCAAGTA GAACCCCTGG ACCCCTTTGG TGTTGAACTC 780
ATGGGGTCTG GGTGGCCAGG AGCATTGTCC AATATGAAAA GAATTTTAAA AGGCAGTACC 840
TTACTGGCAA ATTACTTCCT GACTTCACAG CAAAGCATCA ATGGAATCAA TCTAGAAAAA 900
GGGTTCTTGT TGTGTAACCA AAAGACCGGC AGCTGGTGTT TACTTTTTCC CTTCAAGGCG 960
TGGGGATTAG CAGCTTTATA GATAAGGGCG GTCCTGATCA TAAACCCAGA AGTGTTTGCA 1020
CAAAACAGTA GAGTTAGCCT ATCTCTTCCT GCCTTAAATC CTGCTACTCA CTTCTCTTAC 1080
TTACTAATAA ATGTACTTTG TAGCATTTTT TTTTCCCAGA ATAGGGCACT TTCATCTGTA 1140
TTCAAAACCT GTTCAGGCAG ATGTCTTTTC TGCTCAATTA TTTTTTTTTT TTCTTTGAGA 1200
GAGAGACAGG GTCTTGCTGT CACCCAGGCT GGAGTGCAGT GGTGCAATCA TAGCTCACTG 1260
CAGCCTCAAA CTCCTGGGCT CACGATATCC TCCCGCTTCA GCCTCTTGAC TAGCTGGGAC 1320
TACATGTGTG TGCCACCACA CCCTGTTAAT TTTTTAATTT TTTTTCGTAG ATACAGGGTC 1380
TCATTATATT GCTCAGGCTG CCCTCAAGCT CTTGGGCTCA AGTGATACTC CCACCTTGGC 1440
CTCGCAAAGT GCTGAGATTA CAGACCTGAG CCAGTGTACT TGGCCAGTGA TTTTAGTAAT 1500
GGCATCTGGA AACACATCTA CTGGTTCTTC ATTGGCAGAA GTTGCTTCTC ATGTTATCTT 1560
GATTTTTTTT TTGAGACGGA ATCTTGCTCT GTTACCCAGG CTGAAGTAAA ATGGCGTGAT 1620
TTTGGCTCAC TGAAACCTCC GCCTCCTGGG TTCAAGCAAT TCTTCTGCCT CAGCCTCCCG 1680
AGTAGCTGGG ATTACAGGTG CCTGTTACCA TGCCTGCCTA ATTCTTTTGT ATTTTCAGTA 1740
GAGAGGGGGT TTCACCATGT TGGTCAGGCT GGTCTTGAAC TCCTGACCTC AGGTGATCCG 1800
CCCACTTCGG CCTCCCAAAG TGTTGGGATT ACAGGCATGA GCCACTGCGC CCAGCCATTT 1860
GTTAAGCCAA AACTCTTTCT AAAATTGCCA AACCATTTTT GGTTGGCATT AAATTCTCCA 1920
GTGGTAGATC CTTCACCTTC CTTTTGCTTT AAATTGTCAT ATAATAACTT TGCTTTTTCT 1980
AGAATCACAT TAGTCTATAG GTATGCCTTT 2010