EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-01137

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:35390410-35390790

Target genes

Number: 8
Name	Ensembl ID

GJB4	ENSG00000189433
GJB3	ENSG00000188910
RP1	ENSG00000255811
RP5	ENSG00000230163
DLGAP3	ENSG00000116544
SFPQ	ENSG00000116560
ZMYM4	ENSG00000146463
RP4	ENSG00000229994

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST	MA0138.2	chr1:35390619-35390640	CTCAGCACCCGGGACAGTTCC	+	8.05
REST	MA0138.2	chr1:35390571-35390592	TTCAGCACTCGGGACAGCTCC	+	8.14

Enhancer Sequence

CCTAAATACC ACTAACAACT GTGAAACCTA AACCATAGGG AGAACTCCAA ATCCATATTT 60
CCATCCATGC CCTTGGAAAG TGGGTCATCT GGGAGAATTT TTCTAGTGAG CCCTCCCCAC 120
TGCCCTCCGC CTTTCCACCA TCGGGACCGA ACGAAGCCTC ATTCAGCACT CGGGACAGCT 180
CCGAAGGAGC AAATCCCCGC CGAATCCCAC TCAGCACCCG GGACAGTTCC CAGCGACATT 240
GCCGGCCCCG GTAGCCAGAA ACCCAGGATG CCAGGAAGGA ACAGGTTTAC CCCACCACAC 300
ACCCCCTTTA GAACAGAAGC CCCTCTCCCC TGCCCCTCCC ACTGTCGCTC CCATCCACCG 360
GGGGCACCTG ACAACCCCCC 380