| Tag | Content |
|---|
EnhancerAtlas ID | HS101-00496 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr1:17551210-17552300 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Esrrg | MA0643.1 | chr1:17551951-17551961 | TCAAGGTCAT | + | 6.02 | | RORA | MA0071.1 | chr1:17551950-17551960 | ATCAAGGTCA | + | 6.02 | | RREB1 | MA0073.1 | chr1:17551754-17551774 | GGTGGGGAGGTGTGTTGGGG | - | 7.25 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_27475 | chr1:17550756-17553866 | Esophagus | | SE_33802 | chr1:17551087-17553226 | HCC1954 | | SE_47238 | chr1:17551024-17553477 | Panc1 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I017224 | chr1 | 17550757 | 17553866 |
|
Enhancer Sequence | TGAGGGCTAT ATTTGGACCC CTACACATGT GGGAGTGCTT CCTAAAAGAT TGTTGAGTGA 60
CAGAAGGCAA GGAGAAGACA AGCCTTGGGG TAGAGGAGGC TATGGTGGTC AGCCCCAGGT 120
AACACCTGAA GAGTAAGGAG GAGGACAGAG TGGGCTCAAG GCGTCACCCC ACAGGAACTA 180
TCTGGAAGCT GTCCTGGGAG GGGTAGAAGG TACAATTTAA AGGGAAAGAC TCCAGAGAGG 240
CAGCCTGGAT CACAAAGCTT TGAGGACAAG GTGGGCAGGG CTGCCATGGA TGGCTGCGTG 300
GGTTGTTCAC TGCACAAGAC TGCTTGGGCA TGGTGGCAAC TATGATACAA ATCATGTCTA 360
GGGCCCTGCT GCAGAGTGGC ATCTACCCAG AGGGTGGGCA AGAGTGCCAT AAAGGCTAAC 420
AGTGGCCCTG TGCAATCCCA AGAACCTGGG TTTAAAGGCC AGCTATGCGG CTTGGGACTC 480
ACCTCTCAGA ACCTCCCCGC ACCCTTCTGT GAAATGGGGA AAGTAAGCCC TGCCTTGTGG 540
GTCTGGTGGG GAGGTGTGTT GGGGACAGCA GCAACCACAG AGGCAGGGAG AGCTCCAGCC 600
ATGTTTCCCG ACTTGGCTCA GACCTCAGCT TGCAGAGCCT GCAGGACTGC ATGCGGATGC 660
CAGAGATATC TATGGGACAG GTTCCAGGAG AGTGCTGGGA TGGGAAGGGT CTCCCAAAGA 720
TTCTCCAGAT CCCGACCCTC ATCAAGGTCA TGGCAGGCAG CCTCTGCCCA CCCCCGCCCC 780
ACAGGCAGAG CTAAAGCTTA GCCAGCTTTT GAGGGCCATT TCTTGGTGTG GTAATGACAC 840
CTTTGCTTCT CCAGTGTGAT GGCTGGGTAG AGCCATTGTG TATGGTTGTG CAGGTTGCTC 900
ACTGCACAAG GATGAGGTGG GTCTAGAGCC TTATCTGGAA CTCCATTCCC CAAATAATCC 960
TTTTTAAAAT CTTTAAGCAA ACTAAAAATA TGAAAATCTA TAATCTAATA AAGCAGCCCG 1020
CCCTGGCCAT GTCTAGAACC CCTTCCTGGA GCCTCCTGGG TCCCACTGAT CCCAAGGCAT 1080
CTTATTTTGC 1090
|
