EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00479

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:17116360-17118700

Target genes

Number: 14
Name	Ensembl ID

RP11	ENSG00000178715
ZBTB17	ENSG00000116809
EPHA2	ENSG00000142627
FBXO42	ENSG00000037637
C1orf144	ENSG00000055070
NECAP2	ENSG00000157191
RP4	ENSG00000226029
RP5	ENSG00000233421
NBPF1	ENSG00000219481
CROCCP2	ENSG00000215908
EIF1AP1	ENSG00000236698
SDHB	ENSG00000117118
RP1	ENSG00000227751
RCC2	ENSG00000179051

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOXP1	MA0481.2	chr1:17118445-17118457	TACTGTTTACAT	-	6.11
Foxa2	MA0047.2	chr1:17118448-17118460	TGTTTACATAGT	+	6.22
Foxq1	MA0040.1	chr1:17117269-17117280	AATAAACAATA	-	6.62
TFAP2C	MA0524.2	chr1:17116643-17116655	TGCCTTGGGGCA	-	6.62
ZNF263	MA0528.1	chr1:17118241-17118262	GGAGGAGGAAGAGGAGGGGTT	+	7.39
ZNF263	MA0528.1	chr1:17118238-17118259	CGAGGAGGAGGAAGAGGAGGG	+	7.91

Enhancer Sequence

CAGCTGGGTC TGCAGAGTCC TGTTTGTGCA CAGGATGAAT GGAGTCTGTG TGCCACTCGG 60
GATGCCCCCA CAATACCCAC ATTATCACTG AGGTGCTCCA GCGAGGCATT CATTATGCAC 120
TCCCCTGCCA CCCAAAGCCT CAGGTCAGGT TTGCCTTGGA CACTCTCCCT TCTCCCTTCT 180
CTGAGGCTGA GGGGCTGCAG GGGCGGGTGC CTGAACTCCC TCCCTCTCTC AGGGATGCCT 240
CAGCTCTATG GGACTTCCTC TGGTTCACAT GATTGCATTT TCCTGCCTTG GGGCACCCTA 300
AAGGCCTGCC TCTGGGAAGC AGGGTCTAGA GGCATGAGCT TGTCTGGACA ACAGAAGCTC 360
AATCTCAGCA TCCTAAAGGC CTACCTCTGG GAAGGGGGGG GTCACAGAGG CATGAACTTG 420
TCTGGACAAC AGAAGCTCAA TCTCCATCTC CAAGCAGTTC GATCCCCCAA CACTCTTGGT 480
ATTAGGAGGG GAGCCTCTGC AAGTGTGAGG ACCGGGGGCC TCTAAACAGG GTTTTTTTCT 540
TTTTCTTTTT TTCTTGAGAT GGAGTCTTGC TCTGTTGTCC AAGCTGGAGT GCAGTGGTAC 600
CATCTCCACT CACTGCAACC TCTGCCTCCT GGGTTCAAGA GATTTCTGGC TAATTTTTGT 660
ATTTTTAGTA GAGACGGGGT TTCACCATGT TGGCCAGGCT GGTCTCAAAC TCCTGACCTC 720
AAGTGATCTG CCCACCTCGG TCTCCCAAAG TGCTAGTATT AAAGGCGTGA GCCACCACAC 780
CAAGCCCTAA ACACAGCCTG AGGCTGGTAT CCCAGGAGGC CTTGAAAAAT CTCAGGTTTG 840
CTGCTGACAG GTGTGCCAGG AAGAGACCTG GCTGCTGTCT GCAAGTGGCC AAACCCTGAT 900
AATCCCGGAA ATAAACAATA AAATAAACTC CTCAATGGTG ATTATAAAGT ACTATTGTTT 960
ATCAGCCAGG ACCTGTGCTA AGCTTTTCAC CTACATTATT TCATTTATAT TTCAGAGCAG 1020
TCCTTTGAAG CAGTCATGTT TATATCAGTT TTATGGATGA GGTCAGAGAC TTCTGCTGGT 1080
TAAGTACCTT GCCACTATCA CACAGCTAGC TAGTAAATAA ACTTTAAAAA ATTGAAGTAT 1140
TATGTACATA AAGACAGGCA TAGTGTACAA CTAAGTGGGT TATCATAAAA GTGAACATAC 1200
CTGTGTAACC ATCCACCCAA ATCAAGAGCT AGACTATTAC CAGCCTCAGA AAAATCCCAG 1260
ACCCTCTCCA ATAACCTCCT CTTCCCCAAT GGTGACCATT TTTGTCACCG AGTATTAGAT 1320
GGCTAGTTTG TGAATTTTAT AAAAACAGAA TTCTACATTA TATGTTCTTT TTGTCTGACT 1380
TTTTTCTCCA CTCAGTATGA CATCTGTAAT GCTGATCTAA TGTCATTCAT GTACAAGTAG 1440
TTTGGTCATT TTTAATGCTA TAAAGATGTT CATAGTATGA ATGTATCACA ATTTATTTAT 1500
ACATTTTTCA TTTTGCTGGT TATTTGAGTA GATTTTAATT TTGCCCCATG ACAAATAATG 1560
CTACTTGGAA TGTTCTTGGA TAGTTGACCC TTGAACAATG AGGGTCGGAG CAGTAAAAAA 1620
TTCATGTATA ACTTTTGGCT CTCCCAAACT TAACTAGTAA TAGCTTACTA TTGACCAGAA 1680
CCCTTACTGA TGACATAAAT AATTGATTAA CACATATTTT GAATGTATAT ACTGTATTCT 1740
TACAGTAAAG TGAGCTAGAA AATAGAAAAT ACTTTTAAGA AAATTATAAG AATGAGAAAA 1800
TATATTTACT ATTCATTAAG TAAAAGTGAA TCATCATAAA GGTCTTCATC CTCACCGTCT 1860
TCACATTGAG TAGGCTGACG AGGAGGAGGA AGAGGAGGGG TTGGTCTTGT CTCAGGGATG 1920
GCAGAGGTGG AGGAAAATCT GTGTATAAGT GGACCCACGC AGTTCAAACC CATGTTGCTC 1980
AAGGGTCACC TGTACATGTG TCTTGGTGTA CATATTTCGG CATAGGATAT ACCAAGAAAT 2040
GTAATTGATG GGTCATAAGG TGTGTGGATT TTCAGCTTTA GTAGATACTG TTTACATAGT 2100
TTTGCAAAGT GGCTGTACCA GTTCACTTTC AGCTATGAGA GTCCTGGGGG ATCCACATCC 2160
TCACCAACAC TTGATACTGT TGGTCTCTTT TTACTTTTGC CATCCTGATG AATGTGTTTC 2220
AGTTTGCATT TCCCTGATGA CTAATGAAAT TGAGCAGCTT TTCAAATGCT ATTGGCCATT 2280
TGGATATCTA CTGGCTTATT CAGGTCTCTT GCCTGTTTTT CTACTGGGTT TTCTGTCTTT 2340