EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00414

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:16223210-16225230

Target genes

Number: 26
Name	Ensembl ID

EFHD2	ENSG00000142634
CASP9	ENSG00000132906
DNAJC16	ENSG00000116138
AGMAT	ENSG00000116771
CHCHD2P6	ENSG00000235084
DDI2	ENSG00000197312
RSC1A1	ENSG00000215695
PLEKHM2	ENSG00000116786
SLC25A34	ENSG00000162461
RP11	ENSG00000237938
FBLIM1	ENSG00000162458
SPEN	ENSG00000065526
ZBTB17	ENSG00000116809
EPHA2	ENSG00000142627
ARHGEF19	ENSG00000142632
ANO7L1	ENSG00000237276
RSG1	ENSG00000132881
FBXO42	ENSG00000037637
C1orf144	ENSG00000055070
NECAP2	ENSG00000157191
RP4	ENSG00000226029
RP5	ENSG00000233421
NBPF1	ENSG00000219481
CROCCP2	ENSG00000215908
ESPNP	ENSG00000116219
RP1	ENSG00000239644

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DMRT3	MA0610.1	chr1:16224308-16224319	AATGTATCAAC	+	6.02
FOS	MA0476.1	chr1:16224471-16224482	TCTGACTCATT	+	6.32
IRF1	MA0050.2	chr1:16223850-16223871	TTTTTCTTTCTTTTTTTTTTT	+	6.59
Zfx	MA0146.2	chr1:16224100-16224114	CCCGCCTCGGCCTC	+	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I015897

chr1

16224401

16224550

Enhancer Sequence

TATTAGTTGT TTATATCAGC AATAAAGGGT CATTGTAATC AGAGGAAAAA TTACTAGCTT 60
GGGCAACATA GTGAGATCCT GTCTCTACAA GTAATTTTAA GTGTTAGCCT GGTGTGGTGG 120
CGCATGCCTG TTGTCCTAGC TACTTAGGAG GCTGAGGTGG GAGGATTGCT TGAGCCCAGG 180
AGGTTGAGGC TGCAGTGAGC CATGAGTGCA CCTCTGCACT CCAGCCTGGA TGACAGAGCG 240
AGACCTTGTC GTGAAAGAAA AGAAACATTA GTGTTGGTGG TTGGTTATGG TTCTCTTTCC 300
ACCTCCAGCT TTGTCTAGTA AGAGAAAGCT TTCTTCCTTT GTCAGTTTCA CTCTACTAAT 360
TCAGTTAATC ATTATCATAT CAGCTCTTTT CCCGTTAGAA ATCTTTGTAG TTTCTGATGA 420
CCGGAGAAAT CTGATAGACC AAACAAAGTT GAAATTAAAA TATTGGTTAC ATAATAAAAA 480
CTTTGTTTTT TGGAGATGGA GTCTCGCTTT GTCGCCCAGG CTGGAGTGCA GTGGTTCAAT 540
CTCGGCTCAC TGCAACCTCC ACTTCTGGGT TCAAGCGATT CTCCTGTCTC AGCCACCCGA 600
GTAGCTGGGA CTACAGGCGT ACGCCATCAT GCCTGGCTAA TTTTTCTTTC TTTTTTTTTT 660
TTTTGAGACG GAGTTTCGCT CTTGTTGCCC AGGGTGGAGT GCAGTGGCGT AGTCTCGGCT 720
AACCGCAACC TCCGCCTTCT GGGTTCAAGC GATTCTCCTG CTTGTAATCC TGAGTAGCTG 780
GGATTATAGG CACCAGCCAC CACACCCAGC TAATATTGTA TTTTTAGTAG AGGCGGAGTT 840
TCTCCAAGTT GGTCAGGCTG GTCTTCAAAC TTCCAACCTC AGGTGATCCC CCCGCCTCGG 900
CCTCTCAAAG TGCTGGGATT ACAGGCGTGG GCCACCACGC CTGGCCTAAT TTTTGTATTT 960
TTTAGTAGAG ATGGAGTTTC ACCATATTGG TCAGGATGGT CTCAAACTCC TGACCTTAGG 1020
TGATCCACCT GCCTCGGCCT CCCAAAGTGC TGGGATTACA GGCTTGAGCC ACTGCACCTG 1080
GCCGCATTTT TGCTTTTTAA TGTATCAACA CAGCATTTTC TTAATACTAT CCTAAATTTA 1140
AAGAGTTTAG ATCGCTTTTC AATAACTTTG GCTCTAAAGG GCTTCATTGA TGATTTATAC 1200
AGTTGAGTCC TGCAATGCTT TCCCCGTTTC TTTTGTAATA GTTGCACAGT CACCAGTTAG 1260
GTCTGACTCA TTGCCCTGAT GTCATCTCTG AGGAAGTTTA CCTGGGAAAG ACAGGCTGTG 1320
AGACCCCTTG ATTGAGCAGA GCATTGTGGG CAAAAAGCAG CAGGTAGCTT ACTTTGACTG 1380
GTTTGGAATC GCTTATCTTT TTCTAAGGAA CAAAGGAGAG TGACCACTAA CTTTGTATTT 1440
TACTTCTTAA TTTATCTTTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTAAAAT 1500
AAAATTTACC ATTTTAACGA CTTTTAAGTG TTCAGTTCAG TGGCACTTAA ATACATTGAC 1560
ATTATTTTGC AACCATCACC ACCATCTATC TCCAGAACTT TTTCATCTTC CTCAACTGAA 1620
ACTCTATACC CATTAAATAA TAACTCCCAA TTCTCCCTTT CCCCCAGCCC CTGGCAACCA 1680
CCATTCTACT TTCTGCCTTT ATGAAGTTGA CTACTCCAGG TACCTCCTAT AAATGGAATC 1740
ATACAATCTT TTTTGGGTAT GGCTGGTTTA TTTCATTTAG CATAATATCT TCAAGGTTCA 1800
TTCATGATGT AGCATTTGTC AAAATTTTTT TTTTCTTTTT TTCTTTTTTT TTTTTTTTGT 1860
TTGAGACAGA GTCTCACTCT GTTGCCCAGG CTAGAGTGCA GTGTCTCAGT CTTGGCTCAC 1920
TGCAACCTCC ACCTCCCAGG CTCAAGCGAT TCTCCTGCCT CAGCCTCCCG AGTAGCTGGG 1980
ATTACAGGCA TGTGCAACTA CCGCCTGGCT AATTTTTTTG 2020