EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00403

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:15884290-15886020

Target genes

Number: 22
Name	Ensembl ID

TMEM51	ENSG00000171729
C1orf195	ENSG00000204464
RP1	ENSG00000215720
FHAD1	ENSG00000142621
RP3	ENSG00000228140
EFHD2	ENSG00000142634
CASP9	ENSG00000132906
DNAJC16	ENSG00000116138
AGMAT	ENSG00000116771
RP4	ENSG00000237301
CHCHD2P6	ENSG00000235084
DDI2	ENSG00000197312
RSC1A1	ENSG00000215695
PLEKHM2	ENSG00000116786
RP11	ENSG00000237938
FBLIM1	ENSG00000162458
SPEN	ENSG00000065526
ZBTB17	ENSG00000116809
EPHA2	ENSG00000142627
ARHGEF19	ENSG00000142632
ANO7L1	ENSG00000237276
RSG1	ENSG00000132881

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:15884985-15884997	GTTTGTTTGTTT	+	6.32
Nr2f6(var.2)	MA0728.1	chr1:15884584-15884599	TGAACTCCTGACCTC	-	6.22

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I015558

chr1

15884761

15887000

Enhancer Sequence

CATCATGGCT CACTGCAGCC TTGGCCTCCT ATGCTCAAGT GATCCTCACC CTTCAACCTC 60
CCAAGTAGCT GGGACTACAG GCACATGCCA CCATGCCCAG CTAACAACTT TTTTTTTCCT 120
TTTTTTTCTT TTATGAGACA GGGTTTCACT CCCGTTGCCC AGGCTGGTAT GCTCTCCCAG 180
CCTCAAGCAG TCCTCCTGCC TCAGCCTCCT GAGTAGCTGG GACTAAGGCC ACGCCTGGCT 240
AATTTTTGTA CTTTTAGTAG AGACAGGGTT TCACTATGTT GCACAGGCTG GTCTTGAACT 300
CCTGACCTCA AGTGATCCAC CTGCCTTGAC TTCCCAAAGT GCTGGGATTA CAGGCATGAG 360
CCACCATACC CAGCCCTTTT TTTTTTTTTT TTTTTTTTTT CTTGAGACAG GGTCTCAGTC 420
TGTCACACAG GCTAGAGTCC AGTGGTGTGA TCCTAGCTCA CTGCAGTCTC TTAAGTCTTG 480
GGCTCAAGCA GTCCTCCCAC CTCCACCTCC CAGGTAGCTG GGATTGCAGG CATGCACCAC 540
CATCATGCCT GGCTAATGTT TTTTTATTTT TAGTAGAGAC AAGATCTCAT TATGTTGCCC 600
AGGCTGGTCT CGATCTTCTA AGCTCAAGCA ATCCTCCTGC TTCGGCCTCC CAAAGTTCGG 660
GGATTATAGG AGTGAGCCAC TGTGCCTGGC CTTTTGTTTG TTTGTTTTTA ATTTTTTGTA 720
GAGATGGGAT CTCTCCATGT TGCACAGGCT GGTCTCTAAC TCTTGGGTTC AAGGGATCCT 780
CTTGCCTTGG CCTCCCAAAG CATTTGGGTT AGAGGAATGA GCCTCCATAC CTGGCCGTGT 840
TTCTTAATTT CCAAACATAA AGGGAAATGT TTACATTTCT GGTTTGCATT TTAAATGGAA 900
TTCTAGGTTA ATTACCTTGT GGTCAGAATA CCTGCTGTCA ATGATTTCAA TCCTTTGAAA 960
TGTGTGAAAG TTAGCAATAA AATGGTCACA CGGTTTTGTA ACCTGCCTTT TATACTTTGC 1020
AACATTGTTG CTTTGGGATT TATTTTTAAT TGCCCAGTTC GCTACAAATC CTGAATGGAA 1080
ATAATTTTGC CTAAAATTCA AAATGATTGA CTTTTCGTTT TGGGTTTTTG TTTTGTTTTG 1140
TGTTTGGTTT TGTTTTGTTT TTGAGATGGA GTCTCGCTCT GTCGCCCAGG CTAAAGTGCA 1200
GTGGCGTGAT CTCGGCTCAC TGCAACCTCC GTCTCCCAGG TTCAACTGAT TCTCTTGCCT 1260
CAGCCTTCCA AGTAGCTGGG ACTACAGACA CACGTCACCA TGCCTGGCTA ATTTCTGTAT 1320
TTTTAGCAGA GACGGGGTTT CACTATGTTG GCCAGGCTGG TCTCAAACTC CTGACCTCGT 1380
GATCTACCCA CCTCAGCCTC CCAAAGTTCT AGGATTTCAG ATGTGAGCCA CCACGTCCGG 1440
CCATGACTGA CTTTTTTAAT TTGTCAGCAT AAAACAGTGA ATAAAAATTC TCCAGTGGAA 1500
AGTGTACTTG ATTTTCCCTT TGACCCGAAA TAGCTGCATC ATTGCTTTCA GCCCTGCATT 1560
GCTGAAATAG ATCACCACAT GTTTATTCGC TCAAACAGGT CTGTCTTGTT TGGTTATATT 1620
ACTTTAGCCA AGGTCAGCTA CGTTTTTATT AAGCTGGTAA GTAAAGAAAG CCCATCTATT 1680
TGCATTGAGA ACACTGCATA AAATCTAGCT GATTCTTGGT TTTTCTCTAG 1730