EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00239

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:8402350-8403800

Target genes

Number: 8
Name	Ensembl ID

VAMP3	ENSG00000049245
PER3	ENSG00000049246
RP3	ENSG00000236266
PARK7	ENSG00000116288
ERRFI1	ENSG00000116285
CTA	ENSG00000232848
RP4	ENSG00000234619
ENO1	ENSG00000074800

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_00045	chr1:8402564-8404752	Adipose_Nuclei
SE_01103	chr1:8402952-8404522	Adrenal_Gland
SE_02100	chr1:8402883-8404857	Aorta
SE_31622	chr1:8402873-8404398	Gastric
SE_40658	chr1:8402986-8404310	Left_Ventricle
SE_42166	chr1:8402967-8404415	Lung
SE_48103	chr1:8402886-8404376	Psoas_Muscle
SE_48600	chr1:8402978-8404334	Right_Atrium
SE_53408	chr1:8402965-8404488	Spleen
SE_54819	chr1:8402710-8404669	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I008342

chr1

8402336

8404592

Enhancer Sequence

AATATGCACC ATCTAACAGT GTGTGATGTG CACCGTTCGG CGGTTTCAGC ACACGCAGAG 60
TTGTACAACC ATCACCACCA TCAATTTCAG AACAGTTTTG TCACCCCAGG AAGAAACCCG 120
TCAGCCATCA CCCCTCTGAC CCTCCCACTC TCCCAGGCCT AGGTGACCGC TAACCTTCTT 180
CCTGTCCCCA TGGACTTGCC TATTTGGGAC GTCTCCTGTG ATGGAGTCAG GCAGTCTGCG 240
GCCTCTCGTG TCTGGCATCT GCAGTGCAGC TGTGGGCTTC GAGCTCCATC TGTGCTGTTT 300
CCTGGGTCAG CGCCTCCTTC CCTTTTATGG TCACATAATG TTCCCACCAT AATTTTCCTT 360
TGCAGTGACT TTGAAATCTT AAAATGCTGC ATTGAAATAT TACCTGGACA GTCTGGGCAA 420
CATAGTCAGA CCCCATCTCT AAAAAAATAA AATTAAAAAT TAGCCAGGTG TGGTGGCATG 480
CACCGGTAGT TCCAGCTACT CGGGAGGCTG AGGTGGGAGG ATCACTTGAG CCCAGGAGGC 540
TGAGGCTGCA GTGGGCTGAG ATTGTGCCAC TGCACTCCAG CCTGGGCAAC AGAGCAAGAC 600
CCTGTCTCAA AAAAAAAAAA AAGAAAAGAG AAAAGAAAGA AAGAAAAGAA ATGTGACCTG 660
GATTACTGAG TTTCTCTCTC TCCCTTTTAA TCTCATGCCT CAGTTGCCTC CCCCAGGCCT 720
GGGCCTGATT TGTTTTAGGG AGTTTGGAGT CTGACAAGTT CAGCTGGGCT GGCCCTGAGC 780
ACAGCCCTTC TGATGGGGGG AAGCCGCAGG GGAGGCCCAG GCTCCCAGGT CACAGCAATG 840
CCCACTCACG CAGCACCTTG CAGGCCGGCT GGTGCTGGGG GAGCCCAGTG AGGGAAAGCC 900
ATGCCACCGC TCCCCACCGT CACTCTGCAC AGACCACACT CTCAGCCACT GTCCCCCAGC 960
ATGGCATGCA GGGGAGGGAG AGTGAGTGAC GTGCCCAAGC TGGAGGCCAC GAGGACCTTG 1020
GAGCCTCGGA CAGAGGACCA GCGGCTGTCA TGTGCAGAGG ACTTTGGGGG TGTAGGGCAG 1080
GTCCCATCCT GGATGAAGGT GAAGGAGGGG ATGGCAGGAG TGGAGCGGTC GCCTGGCTGG 1140
GCAGATTGGT TTTCTTTGGG TGAGAGGATG GGGAAGAGCT CAAGTGCTGA GCGGGGAAAG 1200
TGTCTCCCGC CACCTCGGCC CGTGGGAGCT CAGCCCTCTG CCCCATTAGT CATGGATTCT 1260
TTTCATTGTC GTCATCTCTC CGAACACAAA TATTGTTAAA CTCTTGGCTG AACTCCCTGT 1320
GCATGTTGGC GCTGAAAAAT GTGAGGCCGC TGTGTGTGGG CCGCTCGGGC CTCCTGGGCT 1380
CGCAGGACAC ACCGAGCTCG GTCACCCCGT GCTGGCCGCG GCGTGTCTCG CTGACACGTT 1440
TCTTCCTCTG 1450