EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS101-00100

Organism

Homo sapiens

Tissue/cell

HT29

Coordinate

chr1:2120360-2120980

Target genes

Number: 23
Name	Ensembl ID

SSU72	ENSG00000160075
MIB2	ENSG00000197530
NADK	ENSG00000008130
GNB1	ENSG00000078369
RP1	ENSG00000231050
TMEM52	ENSG00000178821
C1orf222	ENSG00000142609
PRKCZ	ENSG00000067606
RP11	ENSG00000182873
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
AL513477.1	ENSG00000178642
MORN1	ENSG00000116151
RER1	ENSG00000157916
PEX10	ENSG00000157911
PLCH2	ENSG00000149527
RP3	ENSG00000224387
PANK4	ENSG00000157881
HES5	ENSG00000197921
TNFRSF14	ENSG00000157873
FAM213B	ENSG00000157870
MMEL1	ENSG00000142606

dbSUPER

Number of super-enhancer constituents: 13
ID	Coordinate	Tissue/cell

SE_02984	chr1:2120458-2122921	Bladder
SE_24063	chr1:2120663-2122484	Colon_Crypt_2
SE_28207	chr1:2120473-2122885	Fetal_Intestine
SE_29530	chr1:2120461-2122870	Fetal_Intestine_Large
SE_40333	chr1:2120433-2122106	K562
SE_46689	chr1:2120655-2122919	Ovary
SE_47622	chr1:2120663-2122616	Pancreas
SE_54645	chr1:2120364-2127955	Stomach_Smooth_Muscle
SE_55632	chr1:2120625-2121047	Thymus
SE_62490	chr1:2120386-2191742	Tonsil
SE_68393	chr1:2120436-2162432	TC32
SE_68394	chr1:2120436-2162432	TC32
SE_69135	chr1:2120546-2121995	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I002188

chr1

2120278

2122904

Enhancer Sequence

GTGAACCCGG GAGGCGGAGC TTGCAGTGAG CCGAAATCGC GCCACTGCAC TCCAGCCTGG 60
GCGACAGAGC GAGACTCCGT CTCAAAAAAG AAAAAAAAAA AAAAAAACAA AAAGAACGCC 120
ACCAGAGGCT GGGGCTGCTG GCTCACGCCT GTAATCCCAG CACTTCAGGA AGCCAAGGCG 180
GGAGGATCGC TTGGGCCTAG GAGTTCGAGA CCAGCCTGGG CAACATGGCA AGACCCCTCC 240
ATCTGTACAA AAAATACTAA AAGTCGCTGG GTGTGGTGAC GCGCGCCTGT AGTCCCAGCT 300
ATTCAGGAGG CTGAGGTGGG AGGATCATCA AGCCCAGGAG TCTGAGGCTG CAATGAGCCG 360
TGATTGCACC ACTGCACTCC AGCCTGGGCG ACAGAGCGAG ACCCTGTCTC AAAAAAAAAA 420
AAACAAAAAA AAAACCGTGA CTGCACATGA GCTAACCACG CCTGTCCACA AAGTTAGGAA 480
AACGAGCTAC CCTCAGCCCG TCCGCTGTCC ACAGTGGGGG CGCCAGGGGA AAGGGGTCAG 540
CTTCCCCGCC TGGGGCTGTG TCTGGTTCTG ATTGCACTGC AGTGAATCTG CCCTAAACCA 600
AACGTCAGAA AGAAAAGCGG 620