EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS101-00090 
Organism
Homo sapiens 
Tissue/cell
HT29 
Coordinate
chr1:1706660-1709720 
Target genes
Number: 48             
NameEnsembl ID
AL669831.1ENSG00000197049
PLEKHN1ENSG00000187583
RP11ENSG00000217801
LINC00115ENSG00000225880
FAM41CENSG00000230368
RNF223ENSG00000237330
C1orf159ENSG00000131591
TTLL10ENSG00000162571
TNFRSF18ENSG00000186891
SDF4ENSG00000078808
B3GALT6ENSG00000176022
FAM132AENSG00000184163
UBE2J2ENSG00000160087
RP5ENSG00000230415
PUSL1ENSG00000169972
ACAP3ENSG00000131584
CPSF3LENSG00000127054
GLTPD1ENSG00000224051
TAS1R3ENSG00000169962
DVL1ENSG00000107404
MXRA8ENSG00000162576
AURKAIP1ENSG00000175756
CCNL2ENSG00000221978
RP4ENSG00000224870
MRPL20ENSG00000242485
TMEM88BENSG00000205116
VWA1ENSG00000179403
ATAD3CENSG00000215915
ATAD3BENSG00000160072
ATAD3AENSG00000197785
AL645728.2ENSG00000215791
SSU72ENSG00000160075
AL645728.1ENSG00000215014
MIB2ENSG00000197530
CDK11BENSG00000248333
SLC35E2BENSG00000189339
CDK11AENSG00000008128
RP1ENSG00000227775
SLC35E2ENSG00000215790
NADKENSG00000008130
GNB1ENSG00000078369
CALML6ENSG00000169885
TMEM52ENSG00000178821
C1orf222ENSG00000142609
PRKCZENSG00000067606
C1orf86ENSG00000162585
SKIENSG00000157933
RER1ENSG00000157916
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs12044597chr11708801hg19
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Foxd3MA0041.1chr1:1707900-1707912AAACAAACAAAC-6.32
SPIBMA0081.2chr1:1707229-1707241CACTTCCCCATT-6.18
ZNF263MA0528.1chr1:1709043-1709064TGGGGAGGAGGGATGGGAGGG+6.14
ZNF263MA0528.1chr1:1709046-1709067GGAGGAGGGATGGGAGGGTGG+7.41
Number of super-enhancer constituents: 19             
IDCoordinateTissue/cell
SE_01401chr1:1706860-1707776Adrenal_Gland
SE_01401chr1:1708234-1713232Adrenal_Gland
SE_09353chr1:1706337-1715519CD14
SE_24151chr1:1706965-1707637Colon_Crypt_2
SE_24151chr1:1709019-1713411Colon_Crypt_2
SE_24972chr1:1706927-1708013Colon_Crypt_3
SE_24972chr1:1708435-1715328Colon_Crypt_3
SE_32018chr1:1706855-1708028Gastric
SE_32018chr1:1708432-1708853Gastric
SE_32018chr1:1708920-1715381Gastric
SE_41662chr1:1706806-1707877LNCaP
SE_41662chr1:1709212-1711084LNCaP
SE_50504chr1:1706807-1708056Sigmoid_Colon
SE_50504chr1:1708166-1715310Sigmoid_Colon
SE_53732chr1:1706670-1708074Spleen
SE_53732chr1:1708121-1715326Spleen
SE_60798chr1:1706583-1715514DHL6
SE_62054chr1:1706412-1732343Toledo
SE_69065chr1:1709133-1715317H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr117069141707800
chr117067921707580
Enhancer Sequence
ATGCCAATAA ATAAATGTGC AAAGAACATG AACAAAAGTC ACACACACAC AAATACAAAC 60
ATAATACACG AGTTCGTTCC CATGTAAGAA CTCAATCAAT ATTTGTTGCA AGACTAAATG 120
AAAAAGGAAA ATTTATTTAG TGACAGAAAT GGGGAAACAT TCAACCTCAA CCCTGAGTGG 180
GAAAAAACTT ACTGCCCACT AAATTACCCA TCTCATCTCA CCCCGGTAAA TAATGCCCAG 240
TGCTGGCATG CACACTGGCA GTATACAAAC TGAGAAAGAC TTTCTGGAAA GTGCTACAGC 300
CATGTGACCA CAGGGCTTCA CCCTGTGACC TCATTAAACC TAAGCAGATT ACAGGTCTGA 360
AGGGGGCTTT CTTTAGATGT GGCTCCACCT ACTTAGGGGC AGATGAAGAA AACAGGGGTC 420
TGGGCAGTTC TGAATGGGAA GGCCAGGCAT CACCTCCCTC TTCAGTTGCA CAAAGTGTGC 480
GTGGCATCCT CACATCCCAT CTGCCTCAAT TTCGCTTTTT CTCTGAACAC TTTTCACCAT 540
CTGTCTGAAG CACACACACA CATTTTATTC ACTTCCCCAT TCCCATGCAT GAATGCTAGG 600
ACCTTTGCAA TTGTGGGCCA GGAAAGATTG CAAATGATAA GCCACCAGCA CAGAGAGTAG 660
AAATGAAATC CTGGGGTTAC AAGCTAAAGC ATTACTGACA CCCACTTGTC CAGAACGGCT 720
GAAGCTGGGC GGTGACTGTC AACAGGTATA TACGGACTAG AAAGTGGAGC TGCTGGAGGA 780
GGCCCTGTAC CTTCCTGCCA TGACACAGCC TCCCCCCAAG TGCTGGGCTT GTGTGCTCAA 840
CACTCCCTCT TGCTGTCATC CTACCACACC TGCAGACTGG AGGTAATCCA GATGCAAGGC 900
CGTCGAGTCC CGCAAACACC CACCTGCCTC TTAATTTTCC AAGTGAGACC TACATTTCCT 960
CAAGCGTGAA GCTCAATAAA ATCAACTATT GTTTTCCGTT TTCATCACGA GCGCCACTTT 1020
CCCCCTATTT GTTCACCGCC TCCACTCCAC AAGAACTGCT CTTGACTTGG CCAACTTTCT 1080
GGGACACCCT CACTACAAGG ATTTATGAGT CAAACAGGTT TTTGTGCTAG CCTGGAAATC 1140
TAACTGCTGA CAGCAGTTGT TTCAAGAAGA AAATGCTGTT TTGGAACCAA ACAGCAGGCT 1200
GCCAACTGAA ACAACATAAA CCCACCTCCA AGTTCAAATG AAACAAACAA ACAAAAAGAC 1260
TGGTCCAAGT GAGGCAAGCT GTGGTGGCTC ACACCTGTAA TCCCAGCACT TTGGGAGGCC 1320
AAGGTGGGCT GATCACGAGG TCAGGAGTTC GAGACAAGCC TGGCCAACAC AGTGAAACCC 1380
GTCTCTACTA AAAATACAAA AATTAGCTGA GCGTGGTGGT GGGCGCCTGT AATCCCAGCT 1440
ACTCAGGAGG CTGAGGCAGG AAAATCACTT GAACCCGGGA GGTGGAGGTT GCAGTGAGCC 1500
GAGATTGTGC CACTGCACTC CAGCCTGGGC AACAGAGCTA GACTCTGTCT TAAAAAAAAA 1560
AAAAAAAAAA AAAGACTGGT CAAAGTGGCT TACGTCTGTA AGATCAGCAC TTTGGGAAGT 1620
GGAGGCAGGA GGATCTCTTG AGGCCAGGAG GTTGAGACTA GCCTGGACAA CACAGTGAGA 1680
CTCTATCTCT ACAAAAAATT TTATAAATCA GCTAGGTGTG GTGGTGCAGG CCTGTAATCC 1740
CAGCTACTCA GGAGGCTGAG GTGGGAGGAT CAATTGAGCC CAGGAATTTG AGGTTACAGT 1800
GAGCTATAAT CATGCCACCA TAAACACGCC TGGAGGACAG AGTGAGGCCC TGTTTCTAAC 1860
ATACACACAC ATATACACAC AGAAACATCT CGAGAGGACA CCTCCAAATG ATGAAGCTAT 1920
TTTGTTGGGT ACTGCGGTGG CACCTGTGAT TCCTCAAGTA GCTTGGAATC AGCGTGCTAA 1980
CACCATAAAG TGGCTGCAAA AGTCCCAGTG AAGTCACTGC TGAGAGCAAA CAGGCCTTAC 2040
AGAGAAGTTC CAAGGGGACA GGAAATTTCC AGAGGCTTGA GAGGACAATG TTCAGGGGAA 2100
TAAGTACTTG AAGGGAATTA TCTAACAAGG TGTTAAAGTA ACTAGCTTCT TAGACAAGAT 2160
GACATCAGGA GGAAAAAAAA ACTTATTAAG GCAAACATGT CAGTTTCAGG CCAACTAAGG 2220
CTGTCAGAGA GACATGGAAC ACAAGAAGAG AAGAGTTTTG AAATGTATTC CCATCAAGAG 2280
CCAAGAATAA TGAACTTTTG AATGTAAAAC TTAGTGTGTT CCAAAACAAG AAAGGAAAAA 2340
TAACTTGTTA CTCGGAATCG AAGCCAAAAG GAATCTCATT GCTTGGGGAG GAGGGATGGG 2400
AGGGTGGGGG TGGTCCTTGG CCTGGGAAGG AAAACTCCAC CAGGCCTTCG GAGCTGGGCA 2460
CGCCCTGTTC CCACAATTAA GAAAAAAAAC GACGACCTAG AGCTCAAGGC CGGTGCTGAC 2520
ATCTGACCTA CTGGATGGCA GCCGCCTGTA GGAACATCAC CATAGACTAT TGGAATTTTC 2580
TGGCAAGTAC TGGGCACTAA ATCAGAGATG TGTTTTTAGA GAATTCCATG CCAATACTGC 2640
TGTATAGAAT CTTTTATTCA TACTTTCCCA CTAGGTTTGG GCCCCTCTAA GCTTTCACGA 2700
GTCAAAGACC CCTCCTGCTT GCTGAAACCA CCCACGGAAG GCCGGACACC GAGGACCTGG 2760
CCGCCCAAGC AGAGGCGACT GACAAGCGCG GTCCGGGCTG GACGGCCCCA CCTTCCCCGC 2820
CCGGGAGAGC CAGGCCGGAC AGCGGCCTCC CTCAGACCCG TCCCCAAGGC CGAGCCTCGC 2880
CCTGGGCCGT GCTGGTGCCC CATTCGGGAC GGAGCGGTGG CCCGTCAGCA CTTCCACGGC 2940
CTCCTCAGCA GGCCAGATGG GCAGGGCCGG CCTGGTGTCT CCCCGCCTGG CCGCGCGCTC 3000
GCGGGCAGCG ATGACCCCAG GCAGCGGGCG ACCCCAGGCG GACGGCAGGC CGGGTCTGCT 3060