EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS101-00082 
Organism
Homo sapiens 
Tissue/cell
HT29 
Coordinate
chr1:1617030-1618730 
Target genes
Number: 46             
NameEnsembl ID
AL669831.1ENSG00000197049
PLEKHN1ENSG00000187583
RP11ENSG00000217801
FAM87BENSG00000177757
LINC00115ENSG00000225880
FAM41CENSG00000230368
RNF223ENSG00000237330
C1orf159ENSG00000131591
SDF4ENSG00000078808
B3GALT6ENSG00000176022
FAM132AENSG00000184163
UBE2J2ENSG00000160087
RP5ENSG00000230415
PUSL1ENSG00000169972
ACAP3ENSG00000131584
CPSF3LENSG00000127054
GLTPD1ENSG00000224051
TAS1R3ENSG00000169962
DVL1ENSG00000107404
MXRA8ENSG00000162576
AURKAIP1ENSG00000175756
CCNL2ENSG00000221978
RP4ENSG00000224870
MRPL20ENSG00000242485
TMEM88BENSG00000205116
VWA1ENSG00000179403
ATAD3CENSG00000215915
ATAD3BENSG00000160072
ATAD3AENSG00000197785
TMEM240ENSG00000205090
AL645728.2ENSG00000215791
SSU72ENSG00000160075
AL645728.1ENSG00000215014
MIB2ENSG00000197530
MMP23BENSG00000189409
CDK11BENSG00000248333
SLC35E2BENSG00000189339
CDK11AENSG00000008128
RP1ENSG00000227775
SLC35E2ENSG00000215790
NADKENSG00000008130
GNB1ENSG00000078369
TMEM52ENSG00000178821
C1orf222ENSG00000142609
PRKCZENSG00000067606
SKIENSG00000157933
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
NFE2L1MA0089.2chr1:1617775-1617790TTTGCTGACTCATGG-6.4
Nr2f6(var.2)MA0728.1chr1:1618006-1618021GAGGTCAGGAGTTCA+6.22
RARAMA0729.1chr1:1618006-1618024GAGGTCAGGAGTTCATGG+6.39
ZfxMA0146.2chr1:1617982-1617996GAGGCCGAGGCGGG-6.01
Number of super-enhancer constituents: 7             
IDCoordinateTissue/cell
SE_13835chr1:1616834-1618483CD34_Primary_RO01536
SE_27558chr1:1617423-1618832Esophagus
SE_34455chr1:1616569-1618227HCT-116
SE_34455chr1:1618494-1619079HCT-116
SE_40508chr1:1617417-1618219K562
SE_45385chr1:1616829-1617278NHLF
SE_53355chr1:1617565-1618375Spleen
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr116175601618333
Number: 1             
IDChromosomeStartEnd
GH01I001685chr116166591618918
Enhancer Sequence
AATCAACAAG GGTAGGGGAA AAGGGTCTCT GAAATGGAAC ACGAACACGA ATGCATGAAC 60
CACACCACAG ATCAAACAAA CGACACAATC ACCCTGAGGG GAGAAGCAGA ACAAGCCCTG 120
GGAACTCGGG TGCATGGACG CTGGATGTGG GTACGCAGGT GATGGACACA AGGGCTCCAG 180
ACACACAAGT AGCTCCAGAC ACAGGAGCTC CAAACAAATA CCGAGTTCTA AACATGCTTT 240
TTTCCCTTTT CTTTTCTTGA GACGGAGTCT CGCTCTGTCG CCCAGGCTGG AGTGCAATGG 300
CGCGATCTCA GCTCACTGCA ACCTCTACCT CCCGGGTTCA AGTGATTCTC CTGCCTCAGC 360
CTCCTGAGTA GCTGGGATTA CAGGCACCCG CCACCACGCC CAGTGAATTT TTGTATTTTC 420
ATTTCATTTT TAGATGGAGT TTCACTCTTG TTGCCCAGGC TGGAGTGCAA TGGCACGATC 480
TTGGCTCACC ACAACCTTCG CCTCCCAGGT TCAAGCGATT CTCCTGCCTC AGCCTCCCGG 540
GTAGTGGGGA TTACATGCAC GTGCCACCAA ACCCTGCTGA TTTTGTATTT TTAGTAGAGA 600
CGGGTTTTCA CCATGTTGGC CAGGCTGGTC TCGAACTCCT GACCTCGTGA TCTGCCTGCC 660
TCGGCCTCCC AAAGTGCTGG GATTTACAGG CATCAGCCAC TGCGCCCAGC CTCCCTTTTC 720
TTTTTTTTTC TTTTTTTTTT TTTTTTTTGC TGACTCATGG GTTAGAATTC CGGATTGGGC 780
AAATACATAA ATATTTTGTA CATGACGGGA GGCAGATTTC ATCATGTGAG TGAAGCGAGA 840
TGCAAACACG AAAGGAAGTC CTTCAGGGCA GTCTTGTAGT GAAAAAATAA AAATAAAAAT 900
GAAAAAAAGA GGCTGGGCAC GGTGACTCAC GCCTGTGATC CCAGCACTTT GGGAGGCCGA 960
GGCGGGTGGA TCACCTGAGG TCAGGAGTTC ATGGTGAAAC CCCATCCCTA GTAAAAATAC 1020
AAAAGTTAGC TGGGTGCAGT GGCATGCGCC TGTAATCCCA GCTACTCGGG AGGCTGAGGC 1080
AGAAGAATCA CTTGAACCTA GAAGACGGAG GTCGCAGTGA GCCGAGATCA TGCCACCACA 1140
CTCCAGCCTG GGCGACAGAG ACTCTGTCTC AAAAAAATAA AAAGGCCAGG CACGGAGGCT 1200
CACGCCTGTA ATCCCAGCAC TTTGGGAGTC CAAGGGGGTC GGATCATGAG GTCAGGAGAT 1260
CGAGATCATC CTGGCTAGCA CTGTGAAACC TTGTCTCTAC TAAAAATACA AAAAATTAGC 1320
CGGGCGTGGT GACGGGCACC TGTACTCCCA GCTACTCAGG AGCCTGAGGC AGGAGAAGGG 1380
CGAGAACCCA GGAGGCGGAG CTTGCAGTGA GCTGAGATCG TGCCACTGCA CTCCAGCCTG 1440
GGCCACAGAG TGAGACTCCG TCTCAAAAAC AAATAAATAA ATAAATAAAA AGAAGAAAGA 1500
AGATGGATGG AATGACCCCC GCGGTGTCGG CCTGTGAGGG TGCTGTCGGG CCCGAGCGCA 1560
CAGGCTTGAA CGGATGGGCG GACGGGCGAC ACGCACGCAC ACACACACCC CAACACAGCA 1620
CATCTGCCCA GAGACAGTCA CACCTGCACA GCGCGCTCCC AGCGCCCTAA CCTTGGTTTC 1680
TAAATATCAT TCTCCACTAA 1700