Tag | Content |
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EnhancerAtlas ID | HS101-00082 |
Organism | Homo sapiens |
Tissue/cell | HT29 |
Coordinate | chr1:1617030-1618730 |
Target genes | Number: 46 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NFE2L1 | MA0089.2 | chr1:1617775-1617790 | TTTGCTGACTCATGG | - | 6.4 | Nr2f6(var.2) | MA0728.1 | chr1:1618006-1618021 | GAGGTCAGGAGTTCA | + | 6.22 | RARA | MA0729.1 | chr1:1618006-1618024 | GAGGTCAGGAGTTCATGG | + | 6.39 | Zfx | MA0146.2 | chr1:1617982-1617996 | GAGGCCGAGGCGGG | - | 6.01 |
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| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_13835 | chr1:1616834-1618483 | CD34_Primary_RO01536 | SE_27558 | chr1:1617423-1618832 | Esophagus | SE_34455 | chr1:1616569-1618227 | HCT-116 | SE_34455 | chr1:1618494-1619079 | HCT-116 | SE_40508 | chr1:1617417-1618219 | K562 | SE_45385 | chr1:1616829-1617278 | NHLF | SE_53355 | chr1:1617565-1618375 | Spleen |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I001685 | chr1 | 1616659 | 1618918 |
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Enhancer Sequence | AATCAACAAG GGTAGGGGAA AAGGGTCTCT GAAATGGAAC ACGAACACGA ATGCATGAAC 60 CACACCACAG ATCAAACAAA CGACACAATC ACCCTGAGGG GAGAAGCAGA ACAAGCCCTG 120 GGAACTCGGG TGCATGGACG CTGGATGTGG GTACGCAGGT GATGGACACA AGGGCTCCAG 180 ACACACAAGT AGCTCCAGAC ACAGGAGCTC CAAACAAATA CCGAGTTCTA AACATGCTTT 240 TTTCCCTTTT CTTTTCTTGA GACGGAGTCT CGCTCTGTCG CCCAGGCTGG AGTGCAATGG 300 CGCGATCTCA GCTCACTGCA ACCTCTACCT CCCGGGTTCA AGTGATTCTC CTGCCTCAGC 360 CTCCTGAGTA GCTGGGATTA CAGGCACCCG CCACCACGCC CAGTGAATTT TTGTATTTTC 420 ATTTCATTTT TAGATGGAGT TTCACTCTTG TTGCCCAGGC TGGAGTGCAA TGGCACGATC 480 TTGGCTCACC ACAACCTTCG CCTCCCAGGT TCAAGCGATT CTCCTGCCTC AGCCTCCCGG 540 GTAGTGGGGA TTACATGCAC GTGCCACCAA ACCCTGCTGA TTTTGTATTT TTAGTAGAGA 600 CGGGTTTTCA CCATGTTGGC CAGGCTGGTC TCGAACTCCT GACCTCGTGA TCTGCCTGCC 660 TCGGCCTCCC AAAGTGCTGG GATTTACAGG CATCAGCCAC TGCGCCCAGC CTCCCTTTTC 720 TTTTTTTTTC TTTTTTTTTT TTTTTTTTGC TGACTCATGG GTTAGAATTC CGGATTGGGC 780 AAATACATAA ATATTTTGTA CATGACGGGA GGCAGATTTC ATCATGTGAG TGAAGCGAGA 840 TGCAAACACG AAAGGAAGTC CTTCAGGGCA GTCTTGTAGT GAAAAAATAA AAATAAAAAT 900 GAAAAAAAGA GGCTGGGCAC GGTGACTCAC GCCTGTGATC CCAGCACTTT GGGAGGCCGA 960 GGCGGGTGGA TCACCTGAGG TCAGGAGTTC ATGGTGAAAC CCCATCCCTA GTAAAAATAC 1020 AAAAGTTAGC TGGGTGCAGT GGCATGCGCC TGTAATCCCA GCTACTCGGG AGGCTGAGGC 1080 AGAAGAATCA CTTGAACCTA GAAGACGGAG GTCGCAGTGA GCCGAGATCA TGCCACCACA 1140 CTCCAGCCTG GGCGACAGAG ACTCTGTCTC AAAAAAATAA AAAGGCCAGG CACGGAGGCT 1200 CACGCCTGTA ATCCCAGCAC TTTGGGAGTC CAAGGGGGTC GGATCATGAG GTCAGGAGAT 1260 CGAGATCATC CTGGCTAGCA CTGTGAAACC TTGTCTCTAC TAAAAATACA AAAAATTAGC 1320 CGGGCGTGGT GACGGGCACC TGTACTCCCA GCTACTCAGG AGCCTGAGGC AGGAGAAGGG 1380 CGAGAACCCA GGAGGCGGAG CTTGCAGTGA GCTGAGATCG TGCCACTGCA CTCCAGCCTG 1440 GGCCACAGAG TGAGACTCCG TCTCAAAAAC AAATAAATAA ATAAATAAAA AGAAGAAAGA 1500 AGATGGATGG AATGACCCCC GCGGTGTCGG CCTGTGAGGG TGCTGTCGGG CCCGAGCGCA 1560 CAGGCTTGAA CGGATGGGCG GACGGGCGAC ACGCACGCAC ACACACACCC CAACACAGCA 1620 CATCTGCCCA GAGACAGTCA CACCTGCACA GCGCGCTCCC AGCGCCCTAA CCTTGGTTTC 1680 TAAATATCAT TCTCCACTAA 1700
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