Tag | Content |
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EnhancerAtlas ID | HS100-00278 |
Organism | Homo sapiens |
Tissue/cell | HT1080 |
Coordinate | chr5:133435760-133436740 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NFAT5 | MA0606.1 | chr5:133436081-133436091 | AATGGAAAAT | - | 6.02 | NFATC1 | MA0624.1 | chr5:133436081-133436091 | AATGGAAAAT | - | 6.02 | NFATC3 | MA0625.1 | chr5:133436081-133436091 | AATGGAAAAT | - | 6.02 | NFKB1 | MA0105.4 | chr5:133436370-133436383 | CGGGGAATCCCCT | + | 7.12 | NFKB1 | MA0105.4 | chr5:133436370-133436383 | CGGGGAATCCCCT | - | 7.22 | Pou2f3 | MA0627.1 | chr5:133436058-133436074 | TTTGATTTGCATACGA | - | 7.19 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_11859 | chr5:133434150-133437135 | CD3 | SE_14661 | chr5:133434420-133437118 | CD4_Memory_Primary_7pool | SE_15545 | chr5:133435504-133436989 | CD4_Memory_Primary_8pool | SE_15868 | chr5:133435555-133437149 | CD4_Naive_Primary_7pool | SE_16541 | chr5:133435396-133436995 | CD4_Naive_Primary_8pool | SE_16864 | chr5:133434714-133437989 | CD4p_CD225int_CD127p_Tmem | SE_17306 | chr5:133434013-133442187 | CD4p_CD25-_CD45RAp_Naive | SE_17779 | chr5:133433894-133442397 | CD4p_CD25-_CD45ROp_Memory | SE_18300 | chr5:133434019-133437989 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19131 | chr5:133434895-133438108 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20200 | chr5:133434504-133437215 | CD56 | SE_21652 | chr5:133435194-133437085 | CD8_Naive_7pool | SE_21973 | chr5:133435115-133437911 | CD8_Naive_8pool | SE_22418 | chr5:133434549-133438019 | CD8_primiary | SE_30897 | chr5:133434103-133437128 | Fetal_Thymus | SE_39383 | chr5:133435462-133437005 | Jurkat | SE_49860 | chr5:133435431-133437058 | RPMI-8402 | SE_50485 | chr5:133434455-133437093 | Sigmoid_Colon | SE_55097 | chr5:133434867-133436879 | Thymus | SE_62337 | chr5:133403949-133487040 | Tonsil | SE_66306 | chr5:133435462-133437005 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr5 | 133436200 | 133436400 | chr5 | 133436400 | 133436600 |
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| Number: 1 | ID | Chromosome | Start | End |
GH05I134098 | chr5 | 133433961 | 133438092 |
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Enhancer Sequence | CAGAGAAAAC AGAAGCAGCA GGATGCTTTT TATTTGTTAA TCTAGCTTTG ATGCCCCACC 60 TCCTTCTCAC AAGGAGTGGA GGCCCCTCAG GGAGTACTAA GTGCCAGGAG TATAGACCCT 120 AGCAGTGGCC TGGGCTGGTC TCCAGGAGGA GGAGGCAGTC AGGGCTCTCC CTGAAAGCAA 180 GCTGGGGTTA AATATTTTTA GGGCAGAGGA GGCACAAACC AGCCAGAGCT ACCTTCCTTT 240 CTAATCTTAC CCAGGCATTA AGCTTTGAGA GTATCCCCCT CATTTACATA CATTCACATT 300 TGATTTGCAT ACGATGCAAA GAATGGAAAA TTCCCCCAGT GCTTAGCCCC AAGATTACAG 360 TCTCTAATAC TTTATTCCCA CAACCGCGGC ACCCCGTGAC AGACAGGGGG TCCTGCCTGT 420 GATCTAGATC TGGGCTCCCT GCAGCCTGGG ACCCAGCCTG CAGCCTCCTG CCTAGAGGTA 480 GCAGCTCCTG TGAAGGGGGT GGCAGCAGCA GACGCAGGCC TAGCAAAACA AGGTACTTTC 540 ACATGTGACT CACACCAAGG ACCAGAAGCA GAATTACAGT GTGAAAAACC AGAGCCGGCC 600 GAGACTCCGT CGGGGAATCC CCTCCAGCTC CCTCTCTGTT TCACTCCTTT AAAAAGCCCT 660 GGCCATGGCC CAGCACTCTA GAACCCTCCA AGAAAGTGCT GTGCCTCCCA TCCAGGATGG 720 GCAGGGGCCA TGGCACTTCA GCCAGGCCCC TTGACTTTCT CTCTGGGTTC TTGGGCTCAG 780 AAATTACATC TAAGCAGAGA AAGAGGCAGA AGTGGATTCA TCCCAGGGGC AGAGCTGGAA 840 CTGGACCTGG GAGCAGTTGC TGCCTTGCAG GCCCCAGGGC TCCATGCTCA TATTTTTCTT 900 GGCCTGGCTT CCTCCTTCTG ATCCATTCTC TGAGCTACCC ATACACATGC AGCAAACTAT 960 TCTGCAAGAC CACCAGAGCT 980
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