| Tag | Content |
|---|
EnhancerAtlas ID | HS099-13890 |
Organism | Homo sapiens |
Tissue/cell | HSMMtube |
Coordinate | chr20:49056770-49057610 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr20:49056841-49056856 | GAGGTCAGGAGTTCA | + | 6.22 | | Nr5a2 | MA0505.1 | chr20:49056849-49056864 | GAGTTCAAGGCCAGC | + | 8.25 | | RARA | MA0729.1 | chr20:49056841-49056859 | GAGGTCAGGAGTTCAAGG | + | 6.73 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_00918 | chr20:49055454-49057748 | Adrenal_Gland | | SE_31629 | chr20:49056618-49057629 | Gastric | | SE_34001 | chr20:49055295-49058558 | HCC1954 | | SE_35076 | chr20:49055128-49058839 | HeLa | | SE_36034 | chr20:49054845-49058832 | HMEC | | SE_42215 | chr20:49056844-49058813 | Lung | | SE_48118 | chr20:49056153-49058331 | Psoas_Muscle | | SE_51230 | chr20:49057316-49058890 | Skeletal_Muscle | | SE_52679 | chr20:49055432-49058808 | Small_Intestine | | SE_64485 | chr20:49055004-49058700 | NHEK |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I050438 | chr20 | 49054830 | 49059838 |
|
Enhancer Sequence | TTGAGGGCTG GGTGCAGTGG CTCACACCTG TAATCCCAGC ACTTTGGGAG TCTGAGGCAG 60
GTGGATCGGT TGAGGTCAGG AGTTCAAGGC CAGCCTGGGC AACATGGCAA AACCCTGTCT 120
CTACTAAAAA CACAGAAATT TGCTGGGCGT GGTGGCATGC ACCTGTAATC CCAGCTACTG 180
GGGAGGCTGA GGCACAAGAA TGGAGAATTG CCTCCCTCTG AACTTTTTAT TTGGTGCTAT 240
AAATAAACCC TTTCAGGTCT GAGCGGCAGT CAGGTGGATT TCCAGTTACT TGCAGCTGAA 300
TGCATTTCTA CCTGTCACTC CTCCTCAGGA CCATAGGTTG CTCTGGATTC CCACCACACA 360
CGTGGAGATA CTGAGGTCTG GAATGCAGAG AAAACTTCCC CAGTGTCACG TGGTGGAGTC 420
ATGAGTTTAC TGACTCACTA CCCAGTGCTC TTTCCGCTCA AGACAACCTC GTGGTCCGTT 480
CCTTTCATTC GGGCTGCTGT ATGCATGGCC AACAGCTGCT TTGTAAATTA AACACTTCCC 540
ATGGAGGCAG TGATGATGAT GACCTTGCCC CTGAATCTTT CCAGCCTCTT ACGTAAATCG 600
CCCCTGGGTC ACTGTCTCCA TGCCTTTGGA CCCAGGACAG CTTCCCCACA TCCTTTAAAA 660
CGATGAGATA ACCACATGTA AACCCAGTGC TCCTGGAAAG GTGTGAGTCA TGCATCACGG 720
AACAGAAGGT TCACAGCCAG GAGTCCGCCT ATCATGCTTG TCATCCAGCC TTCCAGGCTT 780
GCGTGGAGCT TGTTCACTGC AAAGCTGATT CATCTGCAGC TTGTGGTCAG CTCTGACACT 840
|
