EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS099-05259 
Organism
Homo sapiens 
Tissue/cell
HSMMtube 
Coordinate
chr12:48205290-48207670 
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs56389811chr1248205358hg19
TF binding sites/motifs
Number: 3             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
E2F6MA0471.1chr12:48207505-48207516GGGCGGGAAGG+6.62
MEF2CMA0497.1chr12:48206926-48206941TGCTATTTTTAACCC-6.25
ZfxMA0146.2chr12:48206733-48206747GGGGGCGAGGCCTG+6.69
Number of super-enhancer constituents: 58             
IDCoordinateTissue/cell
SE_00544chr12:48197860-48220773Adipose_Nuclei
SE_00882chr12:48205266-48208854Adrenal_Gland
SE_01648chr12:48203863-48209527Aorta
SE_02973chr12:48205391-48209237Bladder
SE_03238chr12:48205837-48208765Brain_Angular_Gyrus
SE_08980chr12:48205703-48206794Brain_Mid_Frontal_Lobe
SE_08980chr12:48207013-48207527Brain_Mid_Frontal_Lobe
SE_09743chr12:48201017-48215584CD14
SE_10620chr12:48203677-48209540CD19_Primary
SE_11265chr12:48195468-48215028CD20
SE_12040chr12:48203789-48209298CD3
SE_13229chr12:48205244-48209545CD34_Primary_RO01480
SE_13616chr12:48203624-48209343CD34_Primary_RO01536
SE_14755chr12:48203659-48209480CD4_Memory_Primary_7pool
SE_16112chr12:48206211-48208302CD4_Naive_Primary_7pool
SE_17052chr12:48203824-48209374CD4p_CD225int_CD127p_Tmem
SE_17517chr12:48191127-48221413CD4p_CD25-_CD45RAp_Naive
SE_17974chr12:48199123-48215571CD4p_CD25-_CD45ROp_Memory
SE_18525chr12:48200546-48209881CD4p_CD25-_Il17-_PMAstim_Th
SE_19218chr12:48203635-48209626CD4p_CD25-_Il17p_PMAstim_Th17
SE_20360chr12:48203650-48209571CD56
SE_25869chr12:48201048-48219878Duodenum_Smooth_Muscle
SE_29834chr12:48203945-48209285Fetal_Muscle
SE_30941chr12:48203682-48209535Fetal_Thymus
SE_31735chr12:48205268-48209330Gastric
SE_38279chr12:48200655-48216271HUVEC
SE_39308chr12:48203924-48208398IMR90
SE_39528chr12:48203852-48209370Jurkat
SE_40723chr12:48203810-48217110Left_Ventricle
SE_42510chr12:48191948-48209675Lung
SE_43689chr12:48200642-48209483MM1S
SE_44434chr12:48203900-48209434NHDF-Ad
SE_45102chr12:48203873-48208852NHLF
SE_46533chr12:48203649-48209439Osteoblasts
SE_46791chr12:48205293-48206186Ovary
SE_46791chr12:48206220-48209225Ovary
SE_47783chr12:48205710-48208235Pancreas
SE_48510chr12:48203950-48209628Psoas_Muscle
SE_48635chr12:48203836-48209690Right_Atrium
SE_49520chr12:48205332-48206903Right_Ventricle
SE_49520chr12:48206938-48208728Right_Ventricle
SE_50255chr12:48203852-48209628Sigmoid_Colon
SE_51569chr12:48203824-48209614Skeletal_Muscle
SE_52617chr12:48203853-48209510Small_Intestine
SE_53441chr12:48200999-48209674Spleen
SE_54627chr12:48200806-48209409Stomach_Smooth_Muscle
SE_55123chr12:48203836-48208760Thymus
SE_56405chr12:48203753-48208475u87
SE_58422chr12:48190911-48232457Ly1
SE_58933chr12:48196019-48231822Ly3
SE_59730chr12:48194658-48231913Ly4
SE_60618chr12:48196380-48231807DHL6
SE_61048chr12:48191074-48232713HBL1
SE_61662chr12:48195395-48215094Toledo
SE_62352chr12:48195355-48231682Tonsil
SE_65470chr12:48203644-48209066Pancreatic_islets
SE_66445chr12:48203852-48209370Jurkat
SE_67273chr12:48200642-48209483MM1S
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr124820540048207431
chr124820536348205594
Enhancer Sequence
CATAAAAATT ACAACACATA AAGACACATA CGGAAATGGA AAGATGTGCA GTGATCTCTG 60
ACTGATGCGT CTGTGATGTT TTTTATTTTT TAGTTTTTGC TGGTCTGTCC TGTCTGAGTA 120
TCCACAATGC ACATGGACTG CCTCTGTAAT AATTACGCAG CATATATACG TACATAGACA 180
CAGCCCATGG TAGCAAAGTC AAAGTGTGAC CTCGGGCTCC CGTGAGCATT AGTCCACAGG 240
GTTTTCACCG CCCCCGGGTC TTCTTGGACC ATATATCCTC TGAGGTTCCG TGTTATCTAC 300
AACCTAGCGT CCTCTGCCCC TCCTGAGTCT CGCCAAGGGC CTATAACACA GAGCTGGGCA 360
CAAAGTCAGG ACTTACTTAA TGAATGCCTT CTGGCTGAAT AATGATCATT TCCTGAAAGA 420
AATGCCTCAT GCCTCTTCCA GAGCCGCTGT GCTGGGAATA CTCACTGCTG ACATCACTGA 480
CCTGCCCACC CCTCCTCTGT TCTTCATAAG AGCAACAAGG GAAGGGCTAA AATAAAGTTC 540
ACCCCAGCAG ATGCTGGCAA GGTACTCCAC ATCAGGGCCA TCAGGGGCAG CCCCATCCCA 600
GACCCTCCCC AAGCTGGCAC AGCAGCCCCT CTCCAGGGCC AGCTGGCTTC AAGGCCCTGG 660
GGTCCCTCCT CGCCCTGCCT CACTGGGAGA GGCTGGGAGA GGGAGTGAAC AAGAGAAGCA 720
GGGGTCCACC CTATGACTTC TGGCTACAGC TCTCTGGCTG TTCCAGGCCG CGATGGGTGG 780
AGGAATCTGG AACAGGGATT TGGCCTGGTT TTTTCTGTGA ACTGGGGCTA GGCCCAGTTT 840
CTGTTCTTCG TGTCTGCAAC ATTCCCTATC CCTGACCTTC AAAAAATATG AACAATAACA 900
TTAATAATGA TGATGAATAT TCAGTGAGCC CTGACTTCAT ACCAGGCACA GAGCTAACTT 960
TATTTACATT ATCTCCTTTA ATCTTCATAG CAACTCCATA AAGTTGAAAC TGTAATTATT 1020
TTCACATTAC AGATGAAGAA GTGGAGGCAC AGAGCAAAAT GTGCCCATAA TCACACTTGC 1080
AGGAGAAACC GAGACTCAGC CAAGGCCATC CCATTCCTCC CTCTGCGTCC TTACAGGAAG 1140
CTCTCCTGCC AGGCTTTGCC ATATATACAG TAGGGTCTAA GGCGATAATT AACATCTGTA 1200
GAGTGCTTTA AGCACTAAGT GGGGCACAGA GAAAAGCCCC ACTTGAAACT AGGAAATCGA 1260
GTCTCAGAGC CATCAGCATC CTTACTCAAG ATCCCACACC TTTCGACTAA GATTCAAACC 1320
CAGATCTCTG GCGTCAGAAT GGCACATTTC TTCCCTATTA TCACACGATG CCCCTGGCTC 1380
ACTCTCAAGG CGGCCCCGGC TGCCTGGAAG GGAGAGTCAC ACCTCCTTCA GCGCTGGAAT 1440
CTGGGGGGCG AGGCCTGCGC TCAGCCCCTC GCCCGGTGGG GGTGGGGTGC TGCGCCAGCA 1500
CCTCCTCAGC GTCTCCGCCG TGACTCACTC CCGGGACCCA GGGGAAGCAC AGCCCTGCGC 1560
TGCGGGCAAA CATCGTCCGC CGCCCGCCCC GCCTCCAGCT CCCCGCCTCC ACATTTGCTA 1620
ACCGAAACAA GGCTGCTGCT ATTTTTAACC CTCCAGCTCC CCCTTGCCTG GGGCTCCCCC 1680
CTTCACCTCC CCACCCCCCG CCCCAGCCGG GTGCCACCAG CCTGTCATTC TGAGAGCAGT 1740
TCTATAACCT GAACGCGCCT GGGAGGGCGC AGCGGACGTC CCGGACGTGC AGGTTTGTGG 1800
GGCAAGCAAA ACAAGACGGT TACAGCCCAA TCGCCGAATT CCCCCACCCC AGACTCTTTC 1860
CGAACCTGTC ACTCCCAGAC TGCCCTGCTC CTCCTGCCAT TCTGGGGGTT GGGGTAGAGG 1920
GGAATGGGAC TTCTGGGCTG GGGTCACCTC AGGAGCCAGA GCTAGGCTCC TTGGAATGGG 1980
TCCTGCAGGG AGGAAGCTGA ACTGAAGGGG ATTGGAGTTC CCCTACGGAT CCCCAGGGTG 2040
AGAGGCTGAC CCTATAGGCC CAAAGCTTCT GACCACCAGG GTTTACAATC CCTGCAGGCA 2100
AGATGGAGGA AAAAGGAAGT GGTGCGGAGA CAGGGTGGGG ATGGTGAGCT TAGCCCAGGG 2160
CCTTCCTGAC GAGGAGAAGT CCCCTCCCCA TCCTGCTGTG GGGGCTGTGG AGCTTGGGCG 2220
GGAAGGCCTG GGAGTCGGGA AGAGCACTGA GCAGCCTCCA GAGAGGCCCA GGGTGGAAGG 2280
CAGCCTTGGC AGTGTGCAGG GGGAAAAGCG GACCTGGAGT CAGGGCTCCT TTGACACTCA 2340
ATAATCTAAG GCAAGGGCCA GGCAACACCT TCCTGCAGCC 2380