EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS099-01770

Organism

Homo sapiens

Tissue/cell

HSMMtube

Coordinate

chr1:201530730-201532910

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PAX5

MA0014.3

chr1:201532328-201532340

CTGGTCACGCTC

6.18

dbSUPER

Number of super-enhancer constituents: 16
ID	Coordinate	Tissue/cell

SE_02662	chr1:201530490-201533031	Astrocytes
SE_03518	chr1:201531365-201532292	Brain_Angular_Gyrus
SE_05175	chr1:201531173-201533364	Brain_Cingulate_Gyrus
SE_06157	chr1:201531124-201543283	Brain_Hippocampus_Middle
SE_07280	chr1:201531373-201532479	Brain_Hippocampus_Middle_150
SE_08097	chr1:201531243-201532862	Brain_Inferior_Temporal_Lobe
SE_37083	chr1:201528174-201537720	HSMMtube
SE_44518	chr1:201527933-201533209	NHDF-Ad
SE_45347	chr1:201529934-201533172	NHLF
SE_45633	chr1:201527920-201535652	Osteoblasts
SE_52112	chr1:201528377-201533160	Skeletal_Muscle_Myoblast
SE_56031	chr1:201528553-201532965	u87
SE_63919	chr1:201528508-201533164	HSMM
SE_65852	chr1:201531402-201532104	Pancreatic_islets
SE_67744	chr1:201528553-201532965	u87
SE_67991	chr1:201468991-201535915	TC32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I201559

chr1

201528377

201533452

Enhancer Sequence

TTTTTCTTCT GAGTCCTTTT TTTCTGGACA TTGGAAGCTC CCCACAGATA CAGAAGTTTT 60
TCCCTATTAG GCAGTAGGCT TCCTGGGGGC AGGGTTCTGT CTCTTCCATT AGTGTAGGAT 120
CTGGTTAAGG ACAAGGCTGT GTTTGGCTGT GTTCCCTACT CAGCCTGGGG CCTCCATGAG 180
ATTAGGAACT GTGCCTTGCC CATCAGCCTG GGAACTCCCT GCAGGCTGGG GCTCTGTTCC 240
TCCATCAGAT CCCCCATGTT CAGGGCCCTT AGGCAGTAAG CTTGGTCACA GCATGAGACT 300
ATCAATGGTT GGAACAAAGG CACCCAGTTA GGTTTAGGTT TGAGAATCAA CCAAGGAGAC 360
CAAGGAGGTT CTGAAGGTAT TTTTTATTTA TTTATTCCTA TTTATTTTTC GGTTTTTTTA 420
GAGACAAGGT CTTGCTCTGT CACCCAGGCT GGAGTGCAGC GGCACCATCA TAGCTCACTG 480
CAGCCTTGAA CTCCTGGGCT CAGGCGGTTC TCCCACCTTA GCCTCCTAAG TAGCTGAGAC 540
TACAGGCACA CACCACCTTG CCTGGCTAAT TTTTTTTTTT TTTTTTGTAG AGACAGCTGG 600
GTTGGGAAGT CTCACTATGT TGCCTAGGCT GGTCTCGAAC TCCTGGGCTC AAGTGATCCT 660
CTGGCCTTTC AGCCCCAAAA GTGCTGGAAT TACAGGCATG AGCCACCAAA CCCAACCTGA 720
AGGTATTTTT CTAAGGTCAA GTATGCCCCC CGACCTTGGG TCCTAGTTGG TAGAAAGCAT 780
TTCCGAAGTG GAGACATCTG GATGGCAGAT GTGAAGTTGG CTGGGATGGG CGAAGGTCTG 840
GAAGGCTTCA GATTCCAGGC CCCATGACTC ACTCCTCCAT CACAGCAACC CCTCAGCAGC 900
TGGGCCTCCT GAGCCCTGGG CAGGACAGGG TTAGTGGGCC AGGCCCAGGT GGGCAGTGGT 960
CCTTTGCCTT GGACACTGTA TGGTCTGAAA GGATCCCGGC AGGACTGATC ACTTTTGAAA 1020
CTGCTTTCTG AAAGCTCCAA GCTTCCTTCT GAGTGGAGCT TAAGATATAA TATTAAGCAG 1080
GTCATTCTAG GACTGTATGA GAGCAGAATG TGGCATCTCT TTCTGTTTTA GCTTGCAGGG 1140
TACTTCTAGG CGGTTGGTGC TCTCTCCTGG GCCTGGTGGA TGGAAGGGAG CAGGCAGGGA 1200
GGGGTGGGGC AGGCCCTGCC TACAGAGCCT GTCAGTAGGG AACCAGTGAG TCACCAGAAG 1260
TCCAATACCT CAGTCCAGAT CCTGGATGCT GTTGGATCAC GGGATCTGTC TGAGCATCAG 1320
TTTCCTTTTC TGAAAAGTAG GGATGATAAC AGCCTAGGAC GGTGGGTGAA TCAGTGAGGT 1380
AATGCACAGG AACACGCATA GTAAATAGTT TTTGCCAGAG TGGGTGGTTA TGAGTATTTA 1440
GAGTGGCCTG AGCCTCCCAA TTGAAATATC CTGGCCTTTT GTCAAGTCCT AAGAGAGGAT 1500
GTGTGGGGGA AGCTACAGAC TAATGAAGAG GTGACCGGAT CGTCAGAGGG TGCAGACATG 1560
CTTAGCAAGC TGGTGGTGCG ACTCAGGGCT AGCTGCCCCT GGTCACGCTC CCCCTGTGCA 1620
TCCGCGGCAG CAGGAAACAT TTGTCCTCAG GAAACAGCCC CTCGAAGAGC GTCCGGACGC 1680
CGGGACCCAG CCTGGATGGC AGAGGGGGCG TTAACTCGTC CCACAGGTGC CACTGACCCA 1740
ACACGATTTT TTTTCTGGTG TATCTTTCTG GGAGATGTAT CTTTCTGGGA GATGTTGGAA 1800
CTGGGCCCAG AGAAAAGCAT ACGAGACCAC AATCCCCAAG ACACTGCTTG GTGGGGTACC 1860
CCACATGTCT GCTTCAAGTG CCACAGGTAC AGCAAGGAAA GCCTGCAGGA TCCCTCCACA 1920
TCAGAGGTAA GGAAGAACCC AGAATCTGGA ATTGGATGCC AGGAGCTTGA GTTCTGGGCC 1980
TGATATGACC ACCTGGGGGC CCTTTGGCTA ACACCCCACT TCTCTGAGCC TCAGTTTTCT 2040
CATCAGCAAA ATGAGGGCAT GGATCCCTAT TTCAGTGTGT TATTGTAGGG GTAGAATGAG 2100
GTAACATGTG AAAGACCTGC GAAGGCAGAA TGCTGTGGCC CTGACAAGCA GAAGCTTTGC 2160
AGGCAGGCAG ATCTGGTTGG 2180