EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS098-49175

Organism

Homo sapiens

Tissue/cell

HSMM

Coordinate

chr6:90045150-90046450

Target genes

Number: 10
Name	Ensembl ID

RP1	ENSG00000220960
U2	ENSG00000223001
PNRC1	ENSG00000146278
PM20D2	ENSG00000146281
GABRR2	ENSG00000111886
UBE2J1	ENSG00000198833
RRAGD	ENSG00000025039
RP11	ENSG00000218965
ANKRD6	ENSG00000135299
LYRM2	ENSG00000083099

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr6:90046004-90046016	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr6:90046008-90046020	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr6:90046012-90046024	GTTTGTTTGTTT	+	6.32

Enhancer Sequence

CTAGTAGAAA AAGATTTTTT AAATGAAAAT AAATAGTTAA ATGTTTAATT CCCTCTCACT 60
GAGACACTCA AATGCTCGAT CATTAAACTT AAAAGAAAGG AACACTGGAA AATTCCACAT 120
CACATTTATC CACATGCTAT GAATTAGAAA ATTAATGTAA TGATTATAGT CCTGAGACAA 180
GTAAATGTTA GGCTGGCTTT AAAAAAATCC AGGGCTCAGA TGCTATTTTT TCCAATAAAC 240
TATCTAAAGA AAAATAAGTT TTACATCTAT ACAATGAGAA AATTGTCTAT TATACTGTCC 300
TTGAGATCAC ATATAACAAA CCTATTTTAA GGCTGTGAAA AAAGTCCTTT AACAAGATCA 360
AATTATCTGT TAGCAGAAAT ATATATAAAG CAGTAAAGAA ACTAATTAAA CATAGAATTT 420
ACAGATATTT CTAGGGAAAA AAAAACCCCT CACAAATAGC AGTATAACTT GAAAGACTTG 480
GGAGAACTTG CAGAAAATCC AAAGACTTAA TTTATTGCTG ATTATACATT AGGTAGAGAC 540
TCAGGATATG TCTGTTAACT AGATTATTTT CTAAAATATA TTTGTTTTTC CATTTTTCCC 600
TTTGTATTCC AGATATAGTC AAAACTTCCT TGAAGTTTAC AAGAGTCCTC TGAGGATATG 660
AATGACTGAA AGTAAACATG CATCATATAT AAAACATATA TTGTTACACT GTTAAACTTC 720
CTTCTAAAAA ATTGTTTTTC ATAGTACTTC TAGTTCTATT AAAAAACCTT AGGTCTTGAA 780
GAACATGCTA TTTAAAATTA TGAAATATCA TATAAACAAA ATATATGTAA AAGTAGCAAT 840
AATTTAGTTT TTCTGTTTGT TTGTTTGTTT GTTTGAGACA GGGTCTCCTC GTTCTATCAC 900
CCAGGCTGGA ATGCAGTGGT GCAATCATGG CTTGCTGCAG CCTCAACCTC CCAGACCCCA 960
GTGATCTTCC CACTTCAGCC TCCCAAGTAG CTAGGACCAC AGGTGTGTGC CACCACACCC 1020
CGCTAATTTT TATTTTATTT TATTTTTTTT TTTTATTTCA TTTTATTATT ATTTTTTTTT 1080
TTGTAGAGAC AGTGTCTCCC TGTGTTATCC AGATTGGTCC AGAACTCCTA GGCTCAAGCG 1140
ATCCTCCTGC CTCAGCTTCC CAAAGTCCTG GGATTACAAG CATGAGCCAC TGTGCCCAGC 1200
CTAATTTAGT ATTTATTGAT GAGTATTTCT TGTTTTACCA GAAGTGGCAC TGTTGACCAC 1260
ACACCTTTGA GAATTGGTTA TATACAAATT ATTTGCTTCA 1300