Tag | Content |
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EnhancerAtlas ID | HS098-35027 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr20:49056680-49058620 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | + | 6.02 | BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | - | 6.02 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | + | 7.12 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | - | 7.12 | Nr2f6(var.2) | MA0728.1 | chr20:49056841-49056856 | GAGGTCAGGAGTTCA | + | 6.22 | Nr5a2 | MA0505.1 | chr20:49056849-49056864 | GAGTTCAAGGCCAGC | + | 8.25 | RARA | MA0729.1 | chr20:49056841-49056859 | GAGGTCAGGAGTTCAAGG | + | 6.73 | STAT3 | MA0144.2 | chr20:49058321-49058332 | TTTCCCAGAAG | - | 6.62 | USF1 | MA0093.2 | chr20:49058365-49058376 | GTCACGTGACC | + | 6.14 | USF1 | MA0093.2 | chr20:49058364-49058375 | GGTCACGTGAC | - | 6.14 | USF2 | MA0526.2 | chr20:49058361-49058377 | CTGGGTCACGTGACCA | + | 7.69 | USF2 | MA0526.2 | chr20:49058363-49058379 | GGGTCACGTGACCACC | - | 7.88 |
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| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_00918 | chr20:49055454-49057748 | Adrenal_Gland | SE_00918 | chr20:49057773-49058639 | Adrenal_Gland | SE_03055 | chr20:49057830-49058401 | Bladder | SE_31629 | chr20:49056618-49057629 | Gastric | SE_31629 | chr20:49057673-49058675 | Gastric | SE_34001 | chr20:49055295-49058558 | HCC1954 | SE_35076 | chr20:49055128-49058839 | HeLa | SE_36034 | chr20:49054845-49058832 | HMEC | SE_42215 | chr20:49056844-49058813 | Lung | SE_48118 | chr20:49056153-49058331 | Psoas_Muscle | SE_51230 | chr20:49057316-49058890 | Skeletal_Muscle | SE_52679 | chr20:49055432-49058808 | Small_Intestine | SE_64485 | chr20:49055004-49058700 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr20 | 49058248 | 49058472 | chr20 | 49057048 | 49057261 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I050438 | chr20 | 49054830 | 49059838 |
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Enhancer Sequence | TATACAAGTG GATGTATAGC TGTTTCCAGG CTGGAAAACA AACAGCTATG GCAAAAGCAG 60 ACCATGAGAC ATCCATGTAA AATCTGGGAG TTGAGGGCTG GGTGCAGTGG CTCACACCTG 120 TAATCCCAGC ACTTTGGGAG TCTGAGGCAG GTGGATCGGT TGAGGTCAGG AGTTCAAGGC 180 CAGCCTGGGC AACATGGCAA AACCCTGTCT CTACTAAAAA CACAGAAATT TGCTGGGCGT 240 GGTGGCATGC ACCTGTAATC CCAGCTACTG GGGAGGCTGA GGCACAAGAA TGGAGAATTG 300 CCTCCCTCTG AACTTTTTAT TTGGTGCTAT AAATAAACCC TTTCAGGTCT GAGCGGCAGT 360 CAGGTGGATT TCCAGTTACT TGCAGCTGAA TGCATTTCTA CCTGTCACTC CTCCTCAGGA 420 CCATAGGTTG CTCTGGATTC CCACCACACA CGTGGAGATA CTGAGGTCTG GAATGCAGAG 480 AAAACTTCCC CAGTGTCACG TGGTGGAGTC ATGAGTTTAC TGACTCACTA CCCAGTGCTC 540 TTTCCGCTCA AGACAACCTC GTGGTCCGTT CCTTTCATTC GGGCTGCTGT ATGCATGGCC 600 AACAGCTGCT TTGTAAATTA AACACTTCCC ATGGAGGCAG TGATGATGAT GACCTTGCCC 660 CTGAATCTTT CCAGCCTCTT ACGTAAATCG CCCCTGGGTC ACTGTCTCCA TGCCTTTGGA 720 CCCAGGACAG CTTCCCCACA TCCTTTAAAA CGATGAGATA ACCACATGTA AACCCAGTGC 780 TCCTGGAAAG GTGTGAGTCA TGCATCACGG AACAGAAGGT TCACAGCCAG GAGTCCGCCT 840 ATCATGCTTG TCATCCAGCC TTCCAGGCTT GCGTGGAGCT TGTTCACTGC AAAGCTGATT 900 CATCTGCAGC TTGTGGTCAG CTCTGACACT CAGATCATTT TCTGCTCATC TTGTGCCTGG 960 CTAGTGACCT TTAATTAGGT GCTGTCAACT TCCTGTCTTC CTGTCTCTGT CCATGTTGTC 1020 TTTCCCCCTA TTTTAAAAGG ACTGTATGAA TACTAAAGAC ATGATGATGA TGATAGCAGT 1080 TAGCACTTAC TATATTCTAA ATGCTCTATA TAAATTTAAA AGTTGTTTCT CAAAAGCCAT 1140 TGTCTGAGAT AACTAGTATT ACTATTGCAG TTTTATGGAT TGGAAAACAA GGGCTTAGAA 1200 AAGTGAAGTC ACTTTCCTTG GGTAACAGAG CCAGGAGTAT TTGGTGGAGC TGGAATATGA 1260 ACATGAGTGT GTTGGACCCT GGAGTGCAGC TCGAAAACAC AAAGCCAGTT GAGTCTGTTA 1320 AGCTAGCTTC AGAGGCTCCA CTACAGCAGT TTAGACTCTA ATTACATTTA CTGTTTGTTT 1380 AAAAGACTTC TGGACAGACT GGAGACCTCA TGGTGTATTT GTCATCTTAA GGTTGTCATA 1440 AAGGACCCAC AGTCTTTGCA CTTTCCCTCT CCTCCGTCAA CAGCAAGTCA GCAACTTGTC 1500 CTCAGTCTGG TCTTCACATC ACAGATGGCT GCCACAGCTC ACGCATCACC TCTTCACACA 1560 ACAATGTCCA AAGCAGGCAG AGAAGGAAAG GGGCAAATAG GTTTCTCTTT ATGTGCCTCT 1620 TTCTTGTCAT AGAGTAAACT CTTTCCCAGA AGCCCCCAGA TTAGTTTCCC TTTGGACAAA 1680 ACTGGGTCAC GTGACCACCT CTGAGCCAAT CGCAGGTCCA GGAGAACAGG GTGGCTATGA 1740 CTGGGTAAAG CAAATGCAGT TTTTCCCCTA GGACTAGGCA CATGGCCAGC TGCAGAAAGT 1800 CAGGGTTTTC TCAGCAGGAA AGGAGAGGGG AATGGCAGTT GACAAGGCAA CCCGCAGTGT 1860 CTGATACCCC AGCATTTAAA AATGTTTAGC ACAGACACCC ACGTTGATTT GCAATATGAT 1920 TGTAGGTGGT ACATGAAGTT 1940
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