Tag | Content |
---|
EnhancerAtlas ID | HS098-34451 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr20:30147450-30149430 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr20:30148054-30148073 | CCGTCAGCAGGGGGCGCCA | + | 6.49 | TBX20 | MA0689.1 | chr20:30149417-30149428 | CTTCACACCTT | - | 6.32 | TBX21 | MA0690.1 | chr20:30149418-30149428 | TTCACACCTT | - | 6.02 |
|
| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_09510 | chr20:30146765-30150370 | CD14 | SE_23092 | chr20:30146951-30148930 | Colon_Crypt_1 | SE_23092 | chr20:30149044-30151370 | Colon_Crypt_1 | SE_32274 | chr20:30147738-30148980 | Gastric | SE_32274 | chr20:30149021-30150465 | Gastric | SE_34227 | chr20:30147072-30150368 | HCC1954 | SE_34238 | chr20:30145648-30163382 | HCT-116 | SE_35318 | chr20:30146919-30151689 | HepG2 | SE_37902 | chr20:30146814-30150170 | HSMMtube | SE_38363 | chr20:30145976-30151512 | HUVEC | SE_44304 | chr20:30146877-30151332 | NHDF-Ad | SE_45145 | chr20:30146813-30150658 | NHLF | SE_46532 | chr20:30146810-30151514 | Osteoblasts | SE_47160 | chr20:30145636-30151447 | Panc1 | SE_51047 | chr20:30146863-30151755 | Sigmoid_Colon | SE_52081 | chr20:30147001-30150879 | Skeletal_Muscle_Myoblast | SE_52823 | chr20:30147194-30152322 | Small_Intestine | SE_55719 | chr20:30146764-30151515 | u87 | SE_57474 | chr20:30148077-30148790 | VACO_503 | SE_57474 | chr20:30149166-30150497 | VACO_503 | SE_63894 | chr20:30146963-30151068 | HSMM | SE_67615 | chr20:30146764-30151515 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 30148718 | 30149081 | chr20 | 30147629 | 30149253 | chr20 | 30147600 | 30149400 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I031558 | chr20 | 30145981 | 30152591 |
|
Enhancer Sequence | GTGAGTGAGT GAGGGCCTGC CCCAGCATGG GCTTCTCCAG GGATTCTCCA GTGGCCTTCA 60 GGAGCCCAGA GAAGGTACCT CAGGAGACCA GACCCTCCAC CCCCACAGCA GCCAGAGCAA 120 TTCTGATTTT ATCTGCATTT TGCATCTTGA AGTTCTAAGT ATTTGAAGAG CCTGTGGTCA 180 AAAAATTGTT TTAAGAATCA TAGGCCAAGA GATTTAAACC CACAAGGGCC TGGTGGTACT 240 CACAGTGCTT TCTCACTGTG TGACCTTGAC AAGTGGCCTG ACCTTCCTGA GCCTCTGGTT 300 TCTCATCTTG AGTTAATAAC AAGAGTTCCT ACCATGAAAA TCTGGAGAGA GTGCTGAGCA 360 CACACTGACC TCAGTCGCTC TTGGTTGAAT CCTGGTTGCA GTCATCATCA TCATCTTTTA 420 TCAGCCTAGC GTCAGGTCAC CATGTCTCAG CTGCTCTAGC TGTTCCCTGC CCTCTCTTTA 480 CTCAGACATT TTTCAGTCTG TTGTAGACAG TGAGCACGAG GGGGAGAAGG TGGGCAACTT 540 AGGTCAGCGT TTAAAACACA AGAAAGGTCT TATCCAAGTT AATGCACCTA TGCAATGGGA 600 CTTGCCGTCA GCAGGGGGCG CCAGCAACAG CTCCATCATT TTATGCCCCG TCATCCCTGT 660 GAGGGCTGGC AATGTTGCAC TTAACTTTGA GGTGGTTTGT GAACTTCTCT TGATTTCCTC 720 ATGCCTGATA GTTGCAAAAG CAGTAATAAC AGTGACAGTG GTAATGAGAA ACTTACTACC 780 AGCATCATTG AAATCCAGTT TCCATGTGAA ACTTAGGTTT TTCCCACTCA CATACACCTG 840 GGTTATTTGT GTAGTGCCAC TTCAAACCTT AGGAGCATAT GGGCTCACAG TCACCTTTGG 900 AAGAGACCTG GCCAGTCTGT AAGTAGAGGG ATGTCTGTGC CAGCCGTCTC TACTCCTGGC 960 TGTTCAGAGG TAATACAAAG TGAAACCCAT AAGAAGCCCC CAGGCTATTT GCTGGAGACA 1020 GATTCAACTG CCAGCACCCT CAGAGACAGA GTCTCATTTT TTAGCCTGGG CTCACAGCAT 1080 AAGCAGCTCC TCAGCTGATT TCCAGAATCA GTGCAACATT CCCAAAGGGA GTCACTTGTA 1140 TCCCAGTTCT CAAGATAGGT GAGTTCTCAA GGTACTTGCA GCCGAAGGCT TAGAAGCACC 1200 CAGGACAAGG AGAGAAGGGG GTCAGAAGCA CTCATTCATT CCACAAATGT TAATTGAGTC 1260 CATAGTACTG GCTGGGCACA TCCCAGGTGC TGGGGACATG CAGAGGTTAC GGAGCTGGCA 1320 TTGGAGAGGG AAGTCACGTA ATGGCAATGC CGGGCTGTAT ATGATTCATC TGTTCTGAAG 1380 CTGATCTTGG ATGAATCACC TCCAGGAAGC CACTGGCATT TATTCATGCA GCCAGCATCT 1440 AGTTAGTACC ACAAATAGGC TATTGAACTA TTACGTCCAC TGCACTTAAA AGTAGTAACT 1500 TATCTTTGCA GTTTCTGTAT CTGTGTTTCT CAAAGCATGA TCCAACGGTA TGAGATTCAC 1560 CTCAGATGTT TTTTTCAAAA TGCAGATTCC TGGGCCCTGC TCTAGAGCTA TTAGATCAGA 1620 CTCCCTGGGG GTGGGACCTA GAATCCTGCA TTTTTTCACA AGCTTTCCAG ATGATTTTTA 1680 TGCTGACTAA AGTCTTACAG CCACTGTTAT AAGTTGCAGC ATTTGATATT CATAACTACC 1740 AAGGAGATGA GCTCATTTTC CCATTTTGCA GATGAGTAAA CTGAGGCTAA GAGAAGGAAA 1800 GCAACTTGTC CAGAGACACA TAGCTGGGGG CAGTATCAGC GTGCACACCC ACCTCCAGAC 1860 TCCCAGCCCA GAGCTCAGTC ACCCCCCCAC AACCTCTAGG GTCTTCCCCA GCTCCCTCAG 1920 AAGGGGTATT ACTAGTTCAG TCCCTATATC TAACCCTCCT CCTCTTTCTT CACACCTTCC 1980
|