| Tag | Content |
|---|
EnhancerAtlas ID | HS098-34266 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr20:17854370-17855190 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr20:17855039-17855059 | GCCCCACCCACCCACACACT | + | 6.19 | | SP2 | MA0516.2 | chr20:17855035-17855052 | CAAAGCCCCACCCACCC | + | 6.13 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_23578 | chr20:17852942-17858143 | Colon_Crypt_1 | | SE_24205 | chr20:17853643-17856102 | Colon_Crypt_2 | | SE_28415 | chr20:17853999-17857306 | Fetal_Intestine | | SE_29297 | chr20:17854017-17858372 | Fetal_Intestine_Large | | SE_35399 | chr20:17853218-17860231 | HepG2 | | SE_50301 | chr20:17852649-17858273 | Sigmoid_Colon | | SE_52789 | chr20:17853333-17857202 | Small_Intestine |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I017872 | chr20 | 17853493 | 17858320 |
|
Enhancer Sequence | GGATCCTGAA TCCTAGCTAT CCCTTCAGAG CCACCCCTCT GGCTTCCAAG CACCTGCACT 60
ACCCACTCCC ACCCCTCCCT GGAAGGGATG GCGCAGCCTG GGAGCCAGCT GCTCTGGGGG 120
GCTCAGACCT GTGGGCTGGA TTGTCCATGT GTCAGGGAAG GAAAGGGAAG CCCATGGCAG 180
GAGGGACACC CTCTTATGGG TGGTAGCAAC TCCATGGAGC CCAGGCTGCA TCGTTCACTG 240
AGGCTGCTAA TGTTTGAACC TATCTTTGAA TAAGATCCAC CCTCTTGCAC TGGCAAGTCC 300
AAGCTGTAGT AAACCCTGAG GGAGACCCAC AGTCCAGCTG CAAGGCCCTG CCCCACTCTT 360
GGCCGCTGGC AGAAGCTCCA GGCTTGCCGA GGGGTGCCAC GTAGCAGAGG CAGTCTCCGC 420
CTCTAGCCCA TCCCACTCCT TCATCTGCTT CTCGTTAGCT TCAAAAGTAA GGCCTGGCGC 480
TGTGCCCTGG GCAGGAGGGA GAGCTTGGTG TGGCCGCTCA GAGCTTCACC TCCCTTGCCT 540
GGGGTTTCTC TTCTCCTGCC CCATCCATCG TCAGCACAGC TGACTGCTTC TGGGGCTCCT 600
CTGTCTACCT TCCCCACGTT CCAGCACCCC CCTTCCCCTG CCCCTCTGTA GCAACCGCCT 660
CCCTGCAAAG CCCCACCCAC CCACACACTC ATACACACAC CCCTCTCACT CCCCTGGCAC 720
TCAGTCCCTC CAAGCTTCCT TCCTTATCCC TTTAGAGCCC TGCAGCCCTC AGGCAGTGTA 780
GCCCAGAGGT TCAAGGGCAT TCGCTCTGGT ATCAGAAGGG 820
|
