Tag | Content |
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EnhancerAtlas ID | HS098-27536 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr19:19568560-19571150 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr19:19570119-19570140 | AGTTCCTTTCAGTTTTGATTT | + | 6.42 |
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| Number of super-enhancer constituents: 27 | ID | Coordinate | Tissue/cell |
SE_01191 | chr19:19569312-19570032 | Adrenal_Gland | SE_01191 | chr19:19570230-19576031 | Adrenal_Gland | SE_09215 | chr19:19566978-19576630 | CD14 | SE_11973 | chr19:19568425-19574348 | CD3 | SE_13867 | chr19:19568515-19572675 | CD34_Primary_RO01536 | SE_14578 | chr19:19568459-19575548 | CD4_Memory_Primary_7pool | SE_17284 | chr19:19568765-19573940 | CD4p_CD225int_CD127p_Tmem | SE_17695 | chr19:19566792-19574795 | CD4p_CD25-_CD45RAp_Naive | SE_18023 | chr19:19566743-19575441 | CD4p_CD25-_CD45ROp_Memory | SE_18475 | chr19:19566771-19575554 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19438 | chr19:19568475-19574928 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20088 | chr19:19567076-19575380 | CD56 | SE_21336 | chr19:19568398-19575234 | CD8_Memory_7pool | SE_22348 | chr19:19566812-19575641 | CD8_primiary | SE_29832 | chr19:19568434-19576291 | Fetal_Muscle | SE_31176 | chr19:19568500-19574330 | Fetal_Thymus | SE_32371 | chr19:19568507-19570046 | Gastric | SE_32371 | chr19:19570244-19576774 | Gastric | SE_37262 | chr19:19568157-19578447 | HSMMtube | SE_42846 | chr19:19568519-19570076 | Lung | SE_42846 | chr19:19570119-19576767 | Lung | SE_45301 | chr19:19568572-19576209 | NHLF | SE_50636 | chr19:19568444-19570093 | Sigmoid_Colon | SE_50636 | chr19:19570162-19576180 | Sigmoid_Colon | SE_53638 | chr19:19568432-19576267 | Spleen | SE_55298 | chr19:19568606-19569995 | Thymus | SE_55298 | chr19:19570192-19573831 | Thymus |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr19 | 19569200 | 19569224 | chr19 | 19568610 | 19568835 | chr19 | 19570650 | 19571032 | chr19 | 19568851 | 19569351 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I019456 | chr19 | 19567324 | 19576824 |
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Enhancer Sequence | AAAAGATTAA CAAAAGGCCC CTTGCACACT GTGGAAGGCT TATCAGAGTG GCCACCTAGA 60 CAGAGGCATG GTAGCCTGAG TTCAGACCTA GCCTGGACTT TCACCCAGCC AGACTTCAGT 120 TGTGCCTGTA CCTTGTGGGA TGACACATGC CCGTCTCCAA CTCATGCAGG CTCTCAGTGA 180 GAGGTAGTTG GCTCCAGCCA GCTTGCACCT CCCCACTGCT GGTCTTATCC TAGGACCACT 240 GCAGGGAGAC GATCTCTCAG TTTGGGGTCT TTGAAGGCTC AGGGAGCTCC TAGCCAGCTG 300 ACTAGGCTGG GGTCCATCCT GATAACATGA GAGAGAGAAG ATGTCTGTAT CTCTGGTGTG 360 TCTTTACTTT TCAGGCCACC AAGGGTTAAG AACCCAGCGT CAGCCAGTGA GTAGTAGACA 420 TCTGTTCTCC TTTTGAGAAA GCCTGTAGTT CAGGACTCAC CACGGCTTTC CCTTCCTTGG 480 CCTGAAACCC TCCCTGCTCA GCTGCTTGGC GCATGCTGTT CCCCTGCCTG GAACGTCTCG 540 CCTAATTCCT TTTCCTGCCC TGGCCTCAGT CTGGGAGACG CCATCTCAGT CCCCATGTCT 600 TGGAGTTTTA AATGAAAGCA CTTTACTTGT TTGCTCCTCT TTGCCCTGTA GGGCAACCCT 660 GGGAATCACA TGCTTCATGA GTCTAATTTA CAGAAACGTA GGCGTAACTC AGCAGTGCAT 720 ACCAAGCCCA TACTGTTTGC TCTACACTGA AAATGAAGAT GAATGGTGAA AAAAAGTTTC 780 TGCCATTGAG AGCTTAACAT TGAGTTGCAG TGAGAGATGA AGCTCCTGAG TGGCACGGAG 840 ATTGTTGCCA GGGCTCTGGT GAGGTACGCT GTGGCCTGGT GGTTGTGGCC ACTCAGGGAG 900 GCTTGTGGCC TATATAGAAG GCGGGCTGTG GGAATGAGCT GGGGGGTTTG GGTTGACTGT 960 TTAGAATTTG AGAGTCTCTA GCATATGGCA CAGAAGGTAG ATGATTTAAG CTGCGTGGAC 1020 ATCTTCGATA AACACTGGAA GAATGGGCAG TGGTATCCTC TCTCGGCCCA CTGAAGCTTC 1080 TGTGTCCATC TTGTGTCCTT AGTCCTATGC GTTGGAGTAT TGGAGGAGCC AGCTTCCCCC 1140 TCTCTCCAGA GCTTCTCACC CTAGGGAGCC TCCTTCCTCC TCGCCTGGAT GAGGTACTGT 1200 CTTTCTTTGT TAGTTTCTTT CTTTCCTTTT TTCTTTAAGA AACATGGCCT CACTATGTTG 1260 CCCAGCCTGG ACTCATACAC CTGGGCTCAA GTGATGCTCC TGCCTTGGTC TCCTGAGTAG 1320 CTGGGACTAC AGGCATGTGC CACTGTGCCT GGCTTCACAC TTGTGCTTTT GATTCTCATC 1380 CTTAGCAGGT GGGGCTGTTG TTTTATCTGG TTTTCTTTTT TAATCCTTGC TTTCTTTGAA 1440 TACAGGACTG ATTCATAGTC ACTGTTAAAG AATTCAAGCA ATACAGAAAT GTTTACTATA 1500 GTAAGTGAAA GTTTCTTAAT AATCTACTCT TCAGAGATTA CTACCACTGA TTTTGGTCCA 1560 GTTCCTTTCA GTTTTGATTT TAGTGAAGTT ACTTTCAGTT TTTTCCCTAT ATACACCTTT 1620 TTTTTTTTTT TAAACCATGT AAATGGTACT ATGCTATTCT GCAACTTTTC TCCCACAGTT 1680 CTTTCCATTT TTCTTCACAT AGCATTGTCT GTGAAGTAGG GATGGGAAAA CTGAGGCTCA 1740 GCTCAAGCAT CACTTGAGCC CAGGTGTTTT GAGTCCAGCC TGGGCAACAT AGTGAGACCT 1800 TGTTCTTAAA GAAAAAAGTT TGGGTTGACT GTTTAGAATT TGAGAGTCTC TATCTAGCAT 1860 GTGGCACAGA GGGTAGATAA TTTAAGCTGC ATGGACATCT TTGATAAACA CTGTGGAAGA 1920 AGGGGCAGTG GCATCCTCTC TTGGCCCACT GAAGCTTCTG TGTCCATCTT GTGTCCTTGG 1980 TCCTGTGGTT GATTGACAGA CCTCTCCCCT GGCCCATGGC CAGCCAGCGT GTGTGTGATG 2040 GAGCTGAGAC CAAGTCTCTG TTCCCTGCTG TGTCTAGTTG TAGGAGCTGA CTGCTTGGAA 2100 CACCTTTCTG TCTCTCAAGT TAAGTTGTAT CTCTCGTACT TGGCCTTAAT GAAGTTTGAC 2160 ATTGAGAAGT CCAGAGCTGC TGTTTCCGGT GTGGCTTCCT TCCGGAATGA GTCCTAGTCA 2220 CTGTTACTCA GAGATGTGCG TCAGGAAGTG GCTCGGGCCA CAGTTCTGAG CAGATGGAGG 2280 TGTCTGTTCT GCATGGGAAA GAAGTATGCT TGTCAGGCAG GCTCTGCCAA TGCCAAAACT 2340 TGGCCCACCT ATTCTCTCCT TACCCCCTCA ACAGGTCCTT CTGGGCCACA ACAAGGTACC 2400 CTGGTTTGAC TCTTAGGAAG TGGGAGAGCC ACTGAAGGGG GTACAGATCC AGGATGTGGC 2460 TTTGGGAGCT TCCTCGGGCT ATGCTGCCGG GAGGAGAGTA GACAGGGGTT CTGGGTCCAG 2520 AGGCCCATCT GTGCTGTGCA TCAATCTGTG TGAAGGGCAG GGCCACAGGG GCGCTCTGGA 2580 GGTGGGCACC 2590
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