Tag | Content |
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EnhancerAtlas ID | HS098-27243 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr19:13170810-13172940 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
SP1 | MA0079.4 | chr19:13171209-13171224 | GAGGGGCGTGGTCAG | - | 6.19 | SP4 | MA0685.1 | chr19:13171207-13171224 | GGGAGGGGCGTGGTCAG | - | 6.01 | USF2 | MA0526.2 | chr19:13171876-13171892 | GGGAGTCACGTGGCCT | + | 6.38 |
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| Number of super-enhancer constituents: 34 | ID | Coordinate | Tissue/cell |
SE_00024 | chr19:13160708-13176960 | Adipose_Nuclei | SE_01540 | chr19:13160665-13178618 | Aorta | SE_02418 | chr19:13171180-13172515 | Astrocytes | SE_03137 | chr19:13170783-13178623 | Brain_Angular_Gyrus | SE_03859 | chr19:13170623-13178764 | Brain_Anterior_Caudate | SE_04986 | chr19:13170672-13191599 | Brain_Cingulate_Gyrus | SE_05848 | chr19:13160560-13191529 | Brain_Hippocampus_Middle | SE_06678 | chr19:13160758-13191322 | Brain_Hippocampus_Middle_150 | SE_07717 | chr19:13170719-13191634 | Brain_Inferior_Temporal_Lobe | SE_08780 | chr19:13171120-13171533 | Brain_Mid_Frontal_Lobe | SE_08780 | chr19:13172464-13173193 | Brain_Mid_Frontal_Lobe | SE_26520 | chr19:13170726-13172925 | Esophagus | SE_29770 | chr19:13170653-13173122 | Fetal_Muscle | SE_31390 | chr19:13170808-13172511 | Gastric | SE_33451 | chr19:13170810-13173012 | H2171 | SE_35947 | chr19:13170773-13172690 | HMEC | SE_40665 | chr19:13170765-13182230 | Left_Ventricle | SE_41557 | chr19:13170783-13171698 | LNCaP | SE_41557 | chr19:13171785-13172566 | LNCaP | SE_41557 | chr19:13172631-13174288 | LNCaP | SE_42481 | chr19:13160839-13178550 | Lung | SE_44148 | chr19:13169444-13174963 | NHDF-Ad | SE_44758 | chr19:13170742-13172615 | NHLF | SE_45899 | chr19:13170746-13173452 | Osteoblasts | SE_46667 | chr19:13170877-13171728 | Ovary | SE_46667 | chr19:13171802-13172399 | Ovary | SE_47172 | chr19:13160769-13173616 | Panc1 | SE_47634 | chr19:13170755-13172452 | Pancreas | SE_48143 | chr19:13169567-13183512 | Psoas_Muscle | SE_48559 | chr19:13170693-13178599 | Right_Atrium | SE_51076 | chr19:13169565-13183749 | Skeletal_Muscle | SE_54519 | chr19:13170666-13172644 | Stomach_Smooth_Muscle | SE_57153 | chr19:13171180-13172733 | VACO_400 | SE_67980 | chr19:13100968-13183275 | TC32 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 13171369 | 13172271 | chr19 | 13172400 | 13172610 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I013050 | chr19 | 13161049 | 13173134 |
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Enhancer Sequence | TGGGTGGTCT CGAACTCCTG AGCTCAGGCG ATCCACTCGC CTCAGCCTCT CAAAGTGCTG 60 AGATTACAGG CATGAGCCAC CGCACCCGGC CAAGAGGAAC GCTTTTGGCC TCCATTTCTT 120 CCCTCCACTT CAGCCTCTGC TTTGGCAGGC TCTGGGGTGG GAGTAAGCCT GTTCTCAGCT 180 CCCCTTTACT AGGGACAGGT AATTCCACTC TGGCTGCTCC TTGGAGAACA GAGTGGATGA 240 ACTCAGTCCC CACCTCTCAG AGGGACCTAG TACAGAGCCC AGCCCCCACT CTGAGGAAGC 300 CTTGGATGGG CCATTCCTGG CCCAGAGCCT GAGGCCATTG GAAAGGGCCT ATATCTGGAA 360 CGGGTGAAGG AGAGAGCCCG GGAGCCTCAC TGTGGGTGGG AGGGGCGTGG TCAGCCAGCC 420 TTGCCTCCTG GGGCATCAGC TCCCAGCTTG TGCTGCACCC TCTGACCACA ACTTTGTGGG 480 GCGCCTGCTG TGTGCAGAAT CTACCCCGAA ACCTATAGCT TAGGAGAAGC CTGGGTAAGC 540 TGCTAATGGC TGGTAGTATG GGTGTCCAAG GACCTGTTGG AGGAGCCCAG TCCAGCCCTA 600 CATGTGTGAC CCTTGGTGCC TGGCAAGGCG GGGGGGTAGG GAGCAGCCCT CGCACAGCCA 660 GCTAGACTGT TTTGCTCTGG GGCCTGAGGA TTGCGGGGCC AGGGAAGCAA CCAGGCCCAG 720 TCTGGGGCCC TGTGAAGCGA TCTGCACTGC CCAGGGTCAG GGGGATGGGG GGGTCGGCCT 780 CACCTCGGCT AACCTCCCAG CGGAACAAAG GGGCCTTTCT CCACGCCCGC CCGGGAGGGT 840 GTGCCCGCCC GGCTGCTGCC GCCACTGCAG AGGGCGCTGA TTTTTTTTTT CTTCCTGACT 900 TTTCTCCATT TCTGTCTCTG GTTCCTGATC TCTGACTTTT ATTCTCCATT TTTTCACTTT 960 TTATGGGGAT GGGGTAGAGA TCTTCCTTTT CAAGTGTTTA CCAATTGCAG AGACAAGTCT 1020 GCACTGCCAA AAGGTGAGGG CATCCTGGGT GCGTTAGGAA TACTCCGGGA GTCACGTGGC 1080 CTTAGACCCC CCCCTCCCCC CCAAATCGAG GGCAGCTCCG TTCTGAAAGA AGCAGGCAGG 1140 ATTCAGAGCG GCAGCCACAC AGGGTGGGAC CGGGCTCACT GGATAACCCC CAGTCAAGCT 1200 ATGCACCTGG CAGGTCCCCC GCCTTCTATT CGCCCACCCA TTTCGCAGTC CCCTTTCCAT 1260 CCGGCCCATG CACCGCAAGC TGTTCCTAAT CAATGCGAAC GGGAAACTCG GCCCTCATAT 1320 CACGGGATGT GTTTGGCAGC GACAGCAACA GGAGCCGCTG CCACGGGCAG CTCCTTCCTT 1380 GGTGCATAAA CCAGGGTCCC AGTGGCCTGG GCCTGAGTGG GTTCTTCTCC TTCCTCTTGG 1440 GACCCCCTGG GTATGCAGAG GGAACCACAT CCCCTGGAGC TCTGGGCCGG TCGCTGGCCG 1500 CGCCCCGCCG CAGCCCTCGG AGGGCAGCTA GTGTTAACTC GCTGCGCCAC CTAGCTATGG 1560 CGTCCAGGAG TGCAGCGCTT CGCTCCCTGA ACCGCGTCGC TTCCTGAGCC GCGCCGCTCC 1620 CTGAGCCGTG CTGCTCGGCA GCCTGGGGAA AACCTCTTTT TGGTCCTTCA GGGAGCTATG 1680 AATGAGGAAT TTGGCAGCTG TCAGTCGGAG GATCAGTGTC ACTTTGTTCC TTCAGCAGCC 1740 TTTGCTGTCC TTATGCAAGC TTGGTACTTT ATAGTATATA AAACTCAAAG TTAAAATATG 1800 TTAAAAAAAA ATCTGTAAAA ATCCCCACTC ACATCTCATG TTGCTGAGCA GGTCTTGGTT 1860 GTGTTGCACC AAGAAGCAGG AGAGACACAC TGGAGGTCTA ACAGCAGCAA GTCTAGGATT 1920 TGGAGCCTAG GCTTCTGATT CCAGGCCCAG GGCTCTATGC AGCACTCGGT GCCGTCCTAT 1980 TCAACCCATC CCTGCCCAGG CTCTTAGGGC TCCAAGCTGG AAATTTGCAG TCAAAGGCCC 2040 AGATTCCTCG TATTTCCTCT GGACAGCTCT GGACAGTGGC TGCCTTCGGG TCTCCAGGGC 2100 AAGGAGAAGA GCAGGCCTGC GAGAGAGTGC 2130
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