Tag | Content |
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EnhancerAtlas ID | HS098-27118 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr19:10870490-10871510 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr19:10870702-10870723 | GTGTGCTTTCTTTTTTCTTTT | + | 6.03 | Nr2f6(var.2) | MA0728.1 | chr19:10870935-10870950 | TGAACTCCTGACCTC | - | 6.22 |
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| Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
SE_01011 | chr19:10869886-10870691 | Adrenal_Gland | SE_04087 | chr19:10869617-10870629 | Brain_Anterior_Caudate | SE_04989 | chr19:10869289-10871189 | Brain_Cingulate_Gyrus | SE_05916 | chr19:10869208-10871211 | Brain_Hippocampus_Middle | SE_06944 | chr19:10869445-10870736 | Brain_Hippocampus_Middle_150 | SE_08009 | chr19:10869725-10870977 | Brain_Inferior_Temporal_Lobe | SE_11457 | chr19:10864897-10877892 | CD20 | SE_14773 | chr19:10869314-10871611 | CD4_Memory_Primary_7pool | SE_23074 | chr19:10869541-10871660 | Colon_Crypt_1 | SE_23814 | chr19:10869884-10870758 | Colon_Crypt_2 | SE_24803 | chr19:10869760-10870709 | Colon_Crypt_3 | SE_31454 | chr19:10869651-10871415 | Gastric | SE_42575 | chr19:10869402-10871577 | Lung | SE_50068 | chr19:10869393-10871663 | Sigmoid_Colon | SE_52382 | chr19:10869387-10871667 | Small_Intestine | SE_53539 | chr19:10869398-10871720 | Spleen |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I010757 | chr19 | 10868478 | 10878291 |
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Enhancer Sequence | AAATGGGGCG GCCTGAGGTT CAGCAGGAAG TGGATGTGGA TGTGTGGTTG CCAGGAGTTG 60 CTGGGGGCGG AGGGTGGAAC TTGGGTCCTG GGCTGTCATT GGACATTGAA TTCACGTGTT 120 CCACATGTGT GAGGAAATTG AAAAACGGCT CAGTGAACAC TTACACACCC ACACTGCAAG 180 CCCTCAGCTG TGACCAGAAT GCCAGGTGCC ATGTGTGCTT TCTTTTTTCT TTTTTTTGAG 240 ACAGAGTCTC ACTCTGTCAC CCAGGCTGGA GTACAGTGAT GCTATCTTGG CTCACTGCAA 300 CCTCCACCTC CCAGGTTCCA GCGATTCTCC TGCCTCAGCC TCCCAAGTAG CTGGGATTAC 360 AGGTGTGACC CTCCATGGCC AGCTTTTTTT TTTTTTTTGT ATTTTTAGTA GAGACAGGGT 420 TTCACCCTGT TGGCCAGGCT GGTCTTGAAC TCCTGACCTC AAGTGACCCT CTCACTTCGG 480 CCTCCCTAAG TGCTGGGATT ACGGGCATGA GCCACCACAC CGGCCCCATG TGTGCTTTTC 540 ATGTGTTATA GATAACCCGA TTTTGCTGAA CGCTTTCAAA GTCAGTAGCA GACGTGGTGA 600 CACATCCATC CTTCACGCCC CAGTGCACCT CCCCATGCAA TAAAGACGCC TGTCTACAAA 660 GTCCCAGCAC CATGCCCCAG AGAACGAGTC ATTCCCGCAT GTCATCCACG TCCCAGTTTC 720 TACTCAGCAT GTCGCCAGTT GTCCCCCAGA TATCTGGCTG GTTTTATAGC TGCTCTGCTC 780 AATCCAATGC TATACTCTTT TGTAATCTCT TCTTCTCTTT TCATTAAAGC AGCCTCCCCA 840 TAATCACTTT TTTTATTTTT TTTAAGAGAC AGGGTCTCAC TCTGTTCCCC AGGCCGTGCA 900 GTGGTGTAGT CATAGCTCAC TGCGGCCTCG ACCTCCTGGG CCCAAGCAAT CCTCTCCAAT 960 CAGCCTCTCG GGTAGCTAGG ATTACAGGTG CACACACCAC CACACCCAGC TGATTTTTTT 1020
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