Tag | Content |
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EnhancerAtlas ID | HS098-26936 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr19:5953060-5955160 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr19:5953682-5953703 | AAAAAGAAAAAGAAAGAACTC | - | 6.02 | Myod1 | MA0499.1 | chr19:5954796-5954809 | TGCAGCTGCTCCC | + | 6 | Sox6 | MA0515.1 | chr19:5954664-5954674 | AAAACAATGG | - | 6.02 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_01024 | chr19:5953660-5955582 | Adrenal_Gland | SE_04361 | chr19:5947171-5955190 | Brain_Anterior_Caudate | SE_05659 | chr19:5950684-5955150 | Brain_Cingulate_Gyrus | SE_06265 | chr19:5950740-5955430 | Brain_Hippocampus_Middle | SE_08492 | chr19:5947293-5955433 | Brain_Inferior_Temporal_Lobe | SE_14928 | chr19:5951725-5955919 | CD4_Memory_Primary_7pool | SE_19010 | chr19:5951594-5955146 | CD4p_CD25-_Il17-_PMAstim_Th | SE_31266 | chr19:5953066-5954322 | Fetal_Thymus | SE_31728 | chr19:5953160-5955957 | Gastric | SE_38960 | chr19:5951987-5955650 | IMR90 | SE_42610 | chr19:5953147-5956179 | Lung | SE_44587 | chr19:5952213-5955369 | NHDF-Ad | SE_47951 | chr19:5954353-5955066 | Pancreas | SE_49179 | chr19:5950899-5953604 | Right_Atrium | SE_49179 | chr19:5953623-5956045 | Right_Atrium | SE_50862 | chr19:5950825-5955957 | Sigmoid_Colon | SE_53195 | chr19:5950822-5955239 | Small_Intestine | SE_54374 | chr19:5953181-5955269 | Spleen | SE_54795 | chr19:5945993-5955320 | Stomach_Smooth_Muscle | SE_55382 | chr19:5953153-5954410 | Thymus | SE_65343 | chr19:5954123-5955843 | Pancreatic_islets |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I005945 | chr19 | 5945921 | 5956215 |
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Enhancer Sequence | CATCCTCATG GTAATTCAAA ATGCTAAACA GGAGGACCAA GAAGTAAGTC ATAAACATGG 60 AAACCAAGAC ATCAAAACAG GATCAAATTC GTCATCTTTG GTTAAGATGA ATGATTTGTA 120 TAAGTGTTGA GAAGTATTAC ATCACTTCCT CTCTCAGATG GGAGAATTAA CAATGTCATT 180 CCAGCATTTT CTACTCAGGT CCTAGCATTT CTCCTGGGCA GGAATCGTAA GCTCTAAAGA 240 ACTAAGGTGA AGCCTGGAGT TTTTCAACAT GTCTGGTAAA ATCAGACATC AAGAGTTTGC 300 CAGCCTTTGA CCTCATCCTA AAATACACAT GGCTGGCAAA AACCACGTGC ACCAGGGCTA 360 AGCTCATCAC ACCAACGGTA AGCCTCAAAA GCAGGTCTAA ACACCCTACG ACCACATTTT 420 CAGTGATACT GTACTTTCTG CTAAATAGCA TTTCTGTAAC TGCCTTCTTT TTACCAAATG 480 GCCATTATTC TGCTAGTACA ACCTCAAAGC CTCCCCACTT CAGATTAACA AATGCTCTGG 540 AGAGAGAGCA ACTGAAAGAA ATGTTTAGTC TTTACAAAGA ATGGAACAGC CTACATAAGG 600 ATATTTAAAT TCTCTTCACA TTAAAAAGAA AAAGAAAGAA CTCTATCTCC ATCCAAGGCA 660 GTTAAGAAAG AAAGGTTTCA TTTTTGCCCC GGAAACAATG GTGCATGTAA ACGCAGGCGT 720 TTCGATGAGA CAGCACGCCC CTCCCCAGGA AGCGCAGGCA TGGGAAGGGA GTAACATCCC 780 TGTGCTGCCA ATCTGACCAT GGCTTCGTTT TAGGCCCTAG GACTACAATT AAAACCACAC 840 ATGGCTTTTT CTATCCTGGA ACGATAGGAT TTGGCAACCT CACCCAAGGC TAAGTGATGC 900 CACCGGCACC CACACGCAGG CCACGGTCCC AATCCGTAGT GTGCTGAAGT GCAATCTGAC 960 ACATCAACGG GACCCACAGA AAACCGCTGT GTGGCTTTGC CACTGAACAA AAACAAAAAA 1020 TTCCTCGGCT GGCAGCTTCA TGTCTTTCTT TTCAACTCCA AATCATGCTG AATCATGATT 1080 CAGCAATAAA ACCTGAGCAT AAAGAGCTGT CTCCTTTGAA TGGCGTGAGA GGGATGGTGG 1140 AGACGAAGGG GCTCTTTTAC TTGCACCCCA TCGGGTGTGG TCTGAGATCT CGTTTACTGA 1200 AAGGTAAGTC AGCTGGTCCC ACAGTTGATG AGACTTCTTG ATCTTTGAGG ATCAAGAAGT 1260 TGTTAAAGTC ACTATAAGTG ACATCTGAGG GGCAATTAGG ACAATTTAAA ACATGGACTA 1320 TATACTGGAG GATATTACTG AATTAACATT TTCGTAGGAG TAACATGGTG GTAAGGCCAT 1380 GCAGGAGAAT GGCCTCATCC CTATGAGACA CCCGTGGAAG AATTTAGGGC AGAAATGTCA 1440 CATGGGCTTA ACTTCCGGTA TGAGAGGTGA GGGCAGCAAT GCTAACAGAG AGGGCAGGGG 1500 CAGGATACCC AAGTGTTTGC AGTGTCACTC TTTTCCAAGG ATTTGAAAAT TTTCAGAATA 1560 AAATGTTGAA GCAAAAAGGG TGGGGCGGGG GGAACCTCCT CGGAAAAACA ATGGCAGCAG 1620 CTCTAAAAGC TCGGTCCCAG CTCGGCTTCT GGAGAGCAAG ACAGGGATGG GTTGATGGCC 1680 TCCGCAAGAG AGAATGAAAC CATAAAGGCT CTCAAACCCT CACTTCTGAC ACACACTGCA 1740 GCTGCTCCCT GCAGGCCCTG AACCAGAAAG CCAAGGAGAA ACAAAGCCAG CCGCCCGCCC 1800 TGTGTGTTTA CTTTCCACCT CACTCCCCAG TGGCAGAAAG GACTCTAGGG CCATGTGGAC 1860 ACTGTCCTCC GACAGCGAAG CAAACACGCT CCTCCTGCTC CTGGCCTCAG CACAGAGGTT 1920 TCCCACATGC CTCTTCAGCG ACGGTGCCAC AGAAGTGCGA GTGACAGAAG TGGGCAGCCC 1980 AACTCCCAAG GCTGGAGGGC AGTTATTTTT AGAAGTCCAT TTAGAATTGG CTGTGAGCCA 2040 ATATTTTGAT AAGAACTATA CTTGGCATTT TATTTTTAAT TTTTATTTTT AATTTTTTTT 2100
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