Tag | Content |
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EnhancerAtlas ID | HS098-24418 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr17:48745370-48745790 |
Target genes | Number: 17 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NR2C2 | MA0504.1 | chr17:48745526-48745541 | TAAGGTCAGGGGTCA | + | 6.15 | RARA(var.2) | MA0730.1 | chr17:48745420-48745437 | GGGTCAGGGAAGGGTCA | + | 6.78 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_01111 | chr17:48744973-48746542 | Adrenal_Gland | SE_23407 | chr17:48744664-48746086 | Colon_Crypt_1 | SE_24075 | chr17:48745561-48745986 | Colon_Crypt_2 | SE_34277 | chr17:48744612-48746996 | HCT-116 | SE_34841 | chr17:48744429-48747476 | HeLa | SE_47221 | chr17:48744764-48746980 | Panc1 | SE_65786 | chr17:48745101-48746691 | Pancreatic_islets |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I050667 | chr17 | 48744766 | 48746820 |
|
Enhancer Sequence | GTAACCCTGG GTAGGGCTGG GGGCTCTACT GGAGTTGGAA CAGGTTGTTG GGGTCAGGGA 60 AGGGTCACTT AGGGCAAGGG ATAATCAGGG GGAGTTATTG GATTCAGGGA AGGTTGCTAG 120 CATTATGAAG AGCTATTCAA GGTTGAATGA GGTCATTAAG GTCAGGGGTC ATTTGGAGTC 180 ACAGGTGGTC AGGTCGGGTG TCTGGAAACC TGAGTTCTGT AGATAGCCTC CTCTTACCAA 240 CCTGGACTTT CTCTTTGGGC AGTGGGAGCC ATGGAAGACT CAGTCGTGGG AGGGACCCCA 300 GTGCTAGTGT CTGGGCCCTC AGGGGGTCCT GCCTAGCCCA GGATGCTGGG GATGGGGCGA 360 GGGTAGGGGT TGGGGGTTGG GAAAGTACAG TCTCTAGGGC TGACTCACAT CCTCCCGTAG 420
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