Tag | Content |
---|
EnhancerAtlas ID | HS098-23465 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr17:18138850-18139920 |
Target genes | Number: 17 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
SNAI2 | MA0745.2 | chr17:18139736-18139746 | AACAGGTGCA | + | 6.02 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_01194 | chr17:18137336-18140459 | Adrenal_Gland | SE_04584 | chr17:18138631-18139776 | Brain_Anterior_Caudate | SE_05258 | chr17:18129162-18142116 | Brain_Cingulate_Gyrus | SE_06087 | chr17:18129154-18141539 | Brain_Hippocampus_Middle | SE_07516 | chr17:18128857-18141501 | Brain_Hippocampus_Middle_150 | SE_08381 | chr17:18138319-18139799 | Brain_Inferior_Temporal_Lobe |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr17 | 18138987 | 18139592 | chr17 | 18139752 | 18139805 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I018234 | chr17 | 18138278 | 18139899 |
|
Enhancer Sequence | GGTAGGTGTG CGTGCTTATG TGGGTGAGTG GGCCCCTTGC TGTTGGGGGA GAGCCCATCC 60 TGGGCCTGGT GGGTGCAGAG GTGCCAGGAG ACTCAGGCCT GGCCCCTGGT GGGACCAGGT 120 AGTTCCTCCT TGCCCAAGGT GGTTTGGAAT GAAACCTCCC TGGACCTTGG TTCAAGGTGC 180 TGCCCTGATC TGCCTTTTGG CCTGGAACTG AGCTCTACCA AACCCCAGGG CTCCACCCGC 240 CCAGCCTGCC TGCCCTGGGA CTGGAAAATC TGGGCTGGCC CACGCTGAGC TGCCCAGGGA 300 AGGTGCCAGA GAGCCCAGCG TGGGCCTGGC GGGCGCTGAC GTGCCCAGTG ACTCAGGTCT 360 CAACTTCCTG CCCTGCCCCC ACTCCCGCCT GTGCTGGGAC CCTCAGGCCT CTGACTCTGG 420 TGTGCCCTTC CCTGCTGAAG AGCTTGCCGT GGCTTTCAGG GCTGCTGGAA TGAGTCTCAA 480 CCACCCCCAC AGTCACACAC CTCTCACGCC CTGGCTCTGG GCTTTCACCA CCGCCTGGGG 540 CCCTGCTTGG ACTCTGCAGC TGTGTCCCAA GGCTGCGCCC TAGATTTGTC TACTCCTTCC 600 CCTGCCCCCT CCCTGCTTTC TCCCGGCCTC TGTAGTCTTC CTGCTCCTCC ACCTACGTGG 660 CTGCCTTGGG CCCCATGCAG CTCCTCCCCC GGGATGCCCC ATGCTCTGTT CTGTGACTGC 720 CTTACTCTTG ATCACCTCTG ATGGCTGCTC CAGTGCAGGC AGAACCCCCA AAGTCCTCTG 780 TTCTCTACAT GTCCCCCTTT GCCACCTCCT GTTAATCAGG GTGGTCATTT CCACCTTGTT 840 TGGTTTAAAG GCTCCAGGTG CATATGGTGC ATGTGGCCTG GCCTATAACA GGTGCACAGT 900 GTACCTGTGC TGTCTACAGT AGGTGCCTAT TGTTTTTTGT AAAAGTAGGA TTCCGGTCAG 960 TGTTTGGCAC GTGCAGTAGG TGCTTAGTGA GTGGTTATCA GATGAGTGAA TGGAGGGGCG 1020 TGCAGGCCTC CCAGGAACTC GGGTAGCCCT GACATCTGCC CTCCCTGCAG 1070
|