EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS098-13199

Organism

Homo sapiens

Tissue/cell

HSMM

Coordinate

chr12:53472560-53473090

Target genes

Number: 24
Name	Ensembl ID

KRT18	ENSG00000111057
KRT8	ENSG00000170421
EIF4B	ENSG00000063046
TENC1	ENSG00000111077
RP11	ENSG00000257337
SPRYD3	ENSG00000167778
IGFBP6	ENSG00000167779
SOAT2	ENSG00000167780
VTI1BP3	ENSG00000258074
HIGD1AP1	ENSG00000258016
ZNF740	ENSG00000139651
CSAD	ENSG00000139631
ITGB7	ENSG00000139626
RARG	ENSG00000172819
MFSD5	ENSG00000182544
ESPL1	ENSG00000135476
PFDN5	ENSG00000123349
C12orf10	ENSG00000139637
AAAS	ENSG00000094914
SP1	ENSG00000185591
PRR13	ENSG00000205352
PCBP2	ENSG00000197111
MAP3K12	ENSG00000139625
TARBP2	ENSG00000139546

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr12:53472990-53473000	GCCCCGCCCC	+	6.02
MYCN	MA0104.4	chr12:53472690-53472702	CACCACGTGGCC	+	6.07
MYCN	MA0104.4	chr12:53472690-53472702	CACCACGTGGCC	-	6.07

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_56430

chr12:53472238-53475574

u87

Enhancer Sequence

CTAAACACTG GGACAGGGGT TTTCTTGAGG CCTGACATTG CCTTGCACAC GGTAGGTGCT 60
TAGTAAGCCT TGGCTGGGCT GAATTTGATC CCAATACGCA AATTACGACT CTTATGCAGT 120
AGCTACAACC CACCACGTGG CCCAGAAGAG TAGGCACCTG TGGGACAGAC AGCCCTAAGA 180
TTCCACTCCC GGGCACTCAG CCAGGACTCA ACCCCAGGTA GATGCTGGTT GCGCAGACCC 240
CACAGTCTTG GCACCGGCGA GTGGCGGCCC TACTGGGCCC TGTCTCCTCC CCGGGCACGG 300
CCTGATCACT GAGATGAGAC CCGGGAGCAG CCGGGCCCCA GCCCATCCGT GTGCCTACGC 360
CCAGTCTCCC CAGGCCCTGC ACTGGGCCGA GGGTGCAGCA ACAGAAGAAG CCCAGTGACC 420
AGAGCGCAGG GCCCCGCCCC TGGCCCCAGA GCCCCCGCCC AGGACCCCCG CCTTCCGCTT 480
CAGGCTCCGG GGAGATACGA GGCCTCCGGG ACCCCGCCCC CGATCCCCGC 530