EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS098-13008

Organism

Homo sapiens

Tissue/cell

HSMM

Coordinate

chr12:49523790-49525080

Target genes

Number: 19
Name	Ensembl ID

CCNT1	ENSG00000129315
RP11	ENSG00000257653
ADCY6	ENSG00000174233
CACNB3	ENSG00000167535
DDX23	ENSG00000174243
AC073610.5	ENSG00000255863
ARF3	ENSG00000134287
PRKAG1	ENSG00000181929
MLL2	ENSG00000167548
LMBR1L	ENSG00000139636
TUBA1B	ENSG00000123416
TUBA1C	ENSG00000167553
TUBA1A	ENSG00000167552
PRPH	ENSG00000135406
TROAP	ENSG00000135451
C1QL4	ENSG00000186897
DNAJC22	ENSG00000178401
SPATS2	ENSG00000123352
MCRS1	ENSG00000187778

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr12:49524116-49524126	GGGGCGGGGC	-	6.02
NRF1	MA0506.1	chr12:49524573-49524584	GCGCATGCGCA	+	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_30376	chr12:49523202-49527469	Fetal_Muscle
SE_54209	chr12:49523297-49526381	Spleen

Enhancer Sequence

TGAAAACGAA TTTCCTTTTC TAAAGCGATC TTTTCTAAAG ATCCTTTTCT AAGATGTACT 60
ACTTTTGAGA ACAGCTACAC TATAGTCTAC GTTGCTTTTA ATGAATGTTA CCTTCCCATC 120
CTAAACCGGG AAGGCCTCCT TCCAGACCAA GACAGCTCAG TCACAGCTTC CTCCTTTGGA 180
GGACCAAGAC AGGAAGGTGG GCATCCATCC AGCGCTCAGG CCCCAGAAGC CCACTTTAGA 240
CTAGGTGGTC ACATTTCCGG GCAGCTCCTA GCACAGGAAG CACGTGGCCA GACCAGCGCA 300
GAAGAAATGT CTGTCCGCAG GGACAAGGGG CGGGGCTCTG CGGCACAGGA TGAATGAGCA 360
ATTCCGGGCG CGCGCTCTTG CGCCCCCCGG CGGTGCTGCA GAGGCACGAA ATGGCCACGT 420
CTGCAAAGGC GCTGCCCAAG CCGCCCATCC TCCCTTGCCT GCCGGCATCG GGCTCAGCCT 480
AACACCTCCA CAGCAGTCTG AGCGCAGTAG GAGATTATCG GCGGCCCAGA TCTGGGTCAA 540
GATCCGATTT CCGTTCCCTC AAAATCCCTT ACTGCCACCA CCTGCTCCCC TGAATTCCTA 600
ACGCAGCAGG GAGAGACAGG TGGCCTCTAC AGACTGTTGT GTACGAACTG TCGTAATACA 660
CTGGTGTAGA GCGGTACATT GACAGGGAGC TCTTCCGCAG TCCTCTTATT GCTTTCATCA 720
AAAAAAGAAC ACTCAGGTTA ACAGGAGACA CGCCCTGTAG CCCTAGTCGC GTCGCGACCC 780
AGAGCGCATG CGCAAAGCGC AGTGGCGGTT TCCCGCCCAG GAGCGGCGGG AAGGTAACGG 840
TCGCGCGTGC GCGCTTTTGT CTCCAGCTGC TTCCCACCCC CGCTTTTCGC GCTCAAGAGG 900
AAGTGAGGGC TGGAAGAGTC CGCGCGCGCG TCCACCCAAG GCGGAGTAAG GGCATGCGCT 960
GGAAAGGACT GCGGGGACTC GAGGGACCGC ACCCAGGACA CAGTTACGCG ACAAAAGAGA 1020
GCTCCGGATA CGGCGGAGGG CAGCCCGAGC CCCCCATCCC TTCCAGAGTC CGAGAAGAAA 1080
TCCTGGCGCC CCTCGACCTT TCCGGGCCCC CGCTATTTAC ACACACCGAG GTCTCACCAC 1140
TCCCGCCCTG GCCTCTCGCC TCGTTTTCCG CCCTCCAAAC GGACGGCTCT GAGGCCAGCC 1200
CTTCCCGGCT GTATACAGGG CCCCAGCGCC CCGCCGGCTC GCTTTTCCCT GCTTCCCTGA 1260
AAGCAGCCGG GAGCCGCACG GCTTACTCAC 1290