EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS098-12288

Organism

Homo sapiens

Tissue/cell

HSMM

Coordinate

chr12:6688410-6690200

Target genes

Number: 20
Name	Ensembl ID

CD9	ENSG00000010278
TNFRSF1A	ENSG00000067182
LTBR	ENSG00000111321
RP1	ENSG00000256433
CD27	ENSG00000139193
LOC678655	ENSG00000215039
TAPBPL	ENSG00000139192
NCAPD2	ENSG00000010292
MRPL51	ENSG00000111639
SCARNA10	ENSG00000239002
GAPDH	ENSG00000111640
IFFO1	ENSG00000010295
NOP2	ENSG00000111641
SCARNA11	ENSG00000247853
CHD4	ENSG00000111642
ING4	ENSG00000111653
ZNF384	ENSG00000126746
C12orf53	ENSG00000139200
MLF2	ENSG00000089693
C1R	ENSG00000159403

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr12:6690170-6690182	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr12:6690174-6690186	AAACAAACAAAC	-	6.32
Nr2f6(var.2)	MA0728.1	chr12:6688534-6688549	GAGGTCAGGAGTTCA	+	6.22

Enhancer Sequence

TTAGAAACCA GCCTGGCCAA CATGGTGAAA CCCTGTCTCT ACTAAAAGTA CAAAAATTAG 60
CCAGGCGTGG TGGCTCACAC CTGTAATCCC AGCACTATGG GAGGCCGAGA TGGGTGGATC 120
TCTTGAGGTC AGGAGTTCAT GACCAGCCTG GCCAACATGG TGAAACCCCA TCTCTACTAA 180
AATACAAAAA TTAGCCGGGC GTGGTGGCGC ATGCCTGTAA TCCCAGCTAC TCAGGAGGCT 240
GAGGCAGGAG AATTGTTTGA ACCCAGGAGG TGGAGGTTGC AGTGAGCCAA GATCACACCA 300
CTGCACTGCA CATCAGCCTG GGCGACGGAG CAAGACTCCA TCTCAAAAAA AAAAAAAACA 360
ACAACAAAAA AAACAATTAG CCAGGCATGG TGGCTACTCA GCAGACTGAG GCAGGAGAAT 420
CACTTGAACC CAGGAGGCGG AGGTTGCAGT GAGCCAAGAT CGTGCCACTG CACTCCAGCC 480
TGGGTGACAG AGTAAGACTC CGTCTCAAAA AAAAAAAAAA AAAAAATTTT GGCCAGGCGT 540
GGTGGCTCAC GCCTGTAATC CCCGCACTTT GGGAGGCCAA AGCGGGCGGA TCACGAGGTC 600
AGGAGGTGGA GACCATCCTA GCTAACACGG TGAAACCCCG TCTCTACTAA AAATACAAAA 660
AATTAGCCGG GCATGGTGGC AGGCGCCTGT AGTCCCAGCT ACTCAGGAGG CTGAGGCAGG 720
AGAATGGTGT GAACCCGGGA GGCGGAGTTT GCAGTGAGCC GAGATGGCGC CACTGCACTC 780
AAGCCTGGGC GACAAAGCGA GACTCCGTCT CAAAAAAAAA AAAAAAAAAA AAATTACGTG 840
GGCATGGTTG TGGCACGCCT GCAATCCCAG CTACTCAGAG GCTGAGGCAG GAGAATCGCT 900
TGAACCCAGG AGGCGGGAGT TGCAGTGAGC AGAGATCGTG CCACTGCACT CCTGCCTGGG 960
TGACAGAGTG AGACTCCATC TCGAAAACAA CAACAACAAC AACAACAACA ACAAATAAAG 1020
TCATAAGAGA TACCTTAAGT TAGGGGAAAA CCTGCCACCT AAAATCAAGG GTGCAGGATT 1080
CTTCAGTGTG TCGCTTCCTC CTGATATCTC TACAGCCCCA GCAAAAATTC ACGAGTGACC 1140
ATGGTTCACA CAGGGATCTG TAGTGCTTAA TATGGATACC GGCCAGGCAT GGTAGCTCAC 1200
GCCTGTAATC CCAGCACCTT GAGAGGCCAA GGCAGGTGGA TCACCTGAGG TTAGGAGTTG 1260
GAGACTGGCC TGACCAATAT GGAGAAACCC CCTCTCTACT AAAAAATACA AAATTAGCTG 1320
AGCATGGTGG TACATGCCTG TAATCCCAGC TACTCAGGAG GCTGAGGCAG GAGAATCGCT 1380
TGAACTCAGG AGGCGGAGGT TGCAGTAAGC CGAGATCGCA CCATTGCACT CCAGCCTGGG 1440
CAACGAGTAA AACTCCTTTG AAAAAAAAAA AAAAAAAAAA AAAGCCAGGC ACAGTGGCTC 1500
ATGCCTGTAA TCCCAGCAAT CTGGGAGGCA AAAGCAGGTG GATCATGAGG TCAGGAGATT 1560
TAGACCAGCC TGGCCAACAT GGTGAAACCC TGTCTCTACT AAAAATACAA AAATTAGCTG 1620
GGCATGATGG CGTCTGTCTG TAATCCCAGC TCCTCGGGAG GGTGAGGCAG GAGAATCGCT 1680
CGAACCTGGG AGGTGGAGGT TGCAGTAAGC CAAGATCGCG CCACAGCACT CCAGCCTGGC 1740
GGCAGCACTA CACTGTCTCA AAACAAACAA ACAAACAAAA AAAATGTGGA 1790