Tag | Content |
---|
EnhancerAtlas ID | HS098-04724 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr1:205487770-205489480 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HOXA13 | MA0650.2 | chr1:205489066-205489077 | GTTTTATGGGG | - | 6.02 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_03335 | chr1:205484510-205489642 | Brain_Angular_Gyrus | SE_04118 | chr1:205480822-205492493 | Brain_Anterior_Caudate | SE_04919 | chr1:205468740-205495155 | Brain_Cingulate_Gyrus | SE_05883 | chr1:205467701-205496371 | Brain_Hippocampus_Middle | SE_06802 | chr1:205477989-205495317 | Brain_Hippocampus_Middle_150 | SE_08023 | chr1:205478044-205494873 | Brain_Inferior_Temporal_Lobe | SE_08965 | chr1:205488813-205489566 | Brain_Mid_Frontal_Lobe | SE_37621 | chr1:205478889-205490317 | HSMMtube | SE_41325 | chr1:205478905-205489694 | Left_Ventricle | SE_49110 | chr1:205484548-205489642 | Right_Atrium |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 3 | ID | Chromosome | Start | End |
GH01I205517 | chr1 | 205487105 | 205487813 | GH01I205523 | chr1 | 205487830 | 205487975 | GH01I205519 | chr1 | 205488085 | 205489357 |
|
Enhancer Sequence | TCTTGGATGT TCAGCATCTT CACTGGGCAA GGGATGGGGA TGGAGGCTGT GTGAGCGTCT 60 TCCCCTGCTA ACATTCTGGG AGGCCAGCCC TGCTCACTGG GGGCACAGTG GCCTCTGGCA 120 AGTGCTGGCT TTCTTCCCAG CCTGGCTCCT CCTTCCTCCT TCTGTGCCAC CCATGGCTCT 180 GGCACCAGCA GGAGGTTCTG GGCCGGCTGC TGTGTCCCTG GGAAGAAGCA ACTGGAGCTG 240 GCTGAGCTTT ATGACTTACC TGGGCAGGGA GGTGGGAGGG GAGGTTGGCT GGGGTCTGCC 300 TGCCCACCCT GCAGCTCCTC AGTGGGACTC TGCTCCTTCA ACTTCCTCCA CCCCCCACTG 360 CCGGGCCAGT ATCCCTGGAC ACTCATCGCC CTCTTCCCCT GGCACCAATT GCACGGGGAC 420 AGCCCCAGAT GGCTCCTTGG TCTGGGGACA AAGGCTGTGC TGTGCCTGGC CCCGGGCTGG 480 CCTCAGGCTG GTCATACTGA GCCCTTCTGT CCCCACTTGG GGGTGAGGGG TAGATAGCAC 540 TAAGGTGACA GGCCTTTTTC CTGTCTCCCT TCCCCCTCGA CCCCCAAATC TGAGGAGCTG 600 ACTCTCCCAA GGGAAAAATG ACAGAGGCAT CTTGTGTCTT GACCTAGGGA ACAACAGACT 660 ATTCACTGCC CAGTCTGCCC TGTCACACCC AAGACCCTGC TGGGTTCAAT GCCCTGGTTG 720 TCCCCAGCAG AGAGAGACAT CCACTCTGCT GTGGTCACCA CCCCCACCGC CTGCTCCCCT 780 GTCACCATCA GGAAGTCCAC CCTACATCTG ACCTCCATCC TTCCATCAGG AAGTCCATCC 840 TACATCTGAC CTCCATCCTT CCATCAGGAA ATCCATCCTA CATCTGACCC CCATCCCTTC 900 TGCTGCTGTG ACAGCCACTT CCTCTCAGGC TCCTGTCCTG CGGGTGGAGA ACAGCTGGTC 960 CCCATCGCCT GCACTGCTTG GCCCCACATT CCTGCTCCAG TCAGCTGCCT CTGGCCTCAC 1020 CCTTCCTCCA GCTCCCAGCC CCACTGTCCT CCCCACCCCA GGCACAGGCT GGTGGCTCCT 1080 TGCTCCTCAC TGAACCTTAG GGAGAGCAGG TGTGACTCAG GGCTGAATCT CTTTTGTCTT 1140 GCAGAAATGG GGGGCCTCCT TCCCGGAGGC TTTTAATGAG CTCCCCTCCC CTCACCCTAC 1200 AAGCAAGAGC AAGGGTGTGA GATTTATGGT TGCTACTTGT AGATTCCTGA GCCGCAAATC 1260 CAACATGCCA TCCCATAAAT CCCAGACTGC AGGACGGTTT TATGGGGAAG CCCTGTTTTT 1320 AGAAAGGGGT GTGGCTGGTC TCCCTCCTGG CAGAGCTCAG ACCTCAGGGA GCCAAGTGCC 1380 TGCCTCTCCC CACCCCCAGA GAACAACCAT GACAAAGCAC GGGGACATTG GGGACATCAG 1440 TTGGTGTGGT GGAGATGCAC TGGCTTCCAG GACAGAGAGA CTTCCTCTCC TGTGGGGGGC 1500 CTCCTGCTTC CCTTCCCTGC TCTGAGGATC CCCCGTCTCA GCACAGGAGG GTGGCCTGGA 1560 AGCCTGGGCA GATAATTGTC CCTGACCTGG ACCTTAGATG TTTTCCTGGT CACCGCTCCA 1620 GGTGTACATC ATTGGAGATG TTTTTTCAAA TGCATTTTCC CAGGCACCAT TCTCAGAACC 1680 TCAGTTCCAG AATCTCAGGG TGAGACCTAG 1710
|