EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS098-01256

Organism

Homo sapiens

Tissue/cell

HSMM

Coordinate

chr1:32154990-32155340

Target genes

Number: 13
Name	Ensembl ID

FABP3	ENSG00000121769
SERINC2	ENSG00000168528
RP11	ENSG00000215899
TINAGL1	ENSG00000142910
PEF1	ENSG00000162517
COL16A1	ENSG00000084636
BAI2	ENSG00000121753
SPOCD1	ENSG00000134668
AL136115.1	ENSG00000212673
PTP4A2	ENSG00000184007
KHDRBS1	ENSG00000121774
TMEM39B	ENSG00000121775
KPNA6	ENSG00000025800

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RFX1	MA0509.2	chr1:32155127-32155143	GGTTGCCATGGAGACC	+	6.14
RFX1	MA0509.2	chr1:32155127-32155143	GGTTGCCATGGAGACC	-	6.16
RFX2	MA0600.2	chr1:32155127-32155143	GGTTGCCATGGAGACC	-	6.43
RFX2	MA0600.2	chr1:32155127-32155143	GGTTGCCATGGAGACC	+	6.61
RFX5	MA0510.2	chr1:32155127-32155143	GGTTGCCATGGAGACC	-	6.15
RFX5	MA0510.2	chr1:32155127-32155143	GGTTGCCATGGAGACC	+	6.26

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_37841	chr1:32154584-32156642	HSMMtube
SE_45258	chr1:32154043-32156517	NHLF
SE_46488	chr1:32154614-32156704	Osteoblasts
SE_46800	chr1:32155141-32155565	Ovary
SE_56472	chr1:32154314-32156962	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I031687

chr1

32153019

32158386

Enhancer Sequence

TAACCCAGTC CTGCTCACTC CTTTCCTCCA CCCCCAAAAC ATACCCAATC CTAGGACACA 60
GCCTCACTCA CAGTAAGGGT GGGCTCCAGC CCAGCTTGCC CAAAAGGCAC CCTAGAGTCT 120
CCTGGAAAGC CCTGGGAGGT TGCCATGGAG ACCGGAGGTG GCACTCTAGC CCAGCCCTGA 180
GTTCTATGGT TCAGACCCCT TACCACAGTA AGAGCCTAGA CTCTCTGCCC ATAATCTCTC 240
TGTAGCCACG AGAAGTACCC AGCCCCTCTG CCCAATTCCT CTCTATGATC ATGTCCCCAG 300
GTTTCTTTGT GTGTTGGGGG AGGTCCCTCA ATGGTCACCC TGGGCACTCA 350