| Tag | Content |
|---|
EnhancerAtlas ID | HS095-23886 |
Organism | Homo sapiens |
Tissue/cell | HMEC |
Coordinate | chr5:52664420-52665350 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nkx2-5(var.2) | MA0503.1 | chr5:52664504-52664515 | CTTGAGTGCCT | - | 6.14 | | RARA(var.2) | MA0730.1 | chr5:52664517-52664534 | AGGTAAATCTAAGGTCA | + | 6.14 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_35813 | chr5:52663384-52665840 | HMEC | | SE_55919 | chr5:52663133-52666117 | u87 | | SE_67914 | chr5:52663133-52666117 | u87 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I053368 | chr5 | 52664234 | 52665010 |
|
Enhancer Sequence | CATTTAAGCA GGTGATTATA GTAAACATAT AAGGCATGTG GGCCTATTTG TTTGCTCTAG 60
CTCCTGCTTA ACTATTTCCT TTGGCTTGAG TGCCTTGAGG TAAATCTAAG GTCAACGTCT 120
AGCTGAGTCA ATGTACAATG GTGACACAGC AACACATTTA AGACATCTGG TAAGCAGGGA 180
AGCCAGGCAG AAAGAGTTAA GAATGGAAAT TTCAAAATCA TTCTTCACTC TACCCACAGT 240
TCTTTAGAAT GAGAGGCACC TGCTTGAAAT ACATGAACTT TAATAAGAGC CTCTGACTCA 300
GAAAGTTCTA CCTCCCTAAA GAACTTGGGG GACCCAAGTG TAAGTCTGTA GAAATCACTC 360
GGAACCTTCC AATGAAGAAA TTGACTTTAA GGGAAGCTCA GTTAGTTTTT ACCGGTTTGC 420
AAGAACTCTG TGGACCACAA TTTAATGTTA AACACAGCAC AAAAAAAGAC TGTTCTGTCT 480
TAGCAGAGAC CAATCAAGAG CCAAAGCCTA TGGAGGACCA ATCAACAGCA AGGGAGGTGC 540
AGGAATTCCA GCAGAAAGGA CAATAAAACT GGCTTACATA ATTTAAAGAG AGTGTGTTGC 600
ATCCCTTAGC ACCTACTCAC TAACAGTGTT AATGACATCC CTTCAGGGAA AGAATTTTCT 660
ACCTAAGAAG AAACATAAAA ATTGAACTTT ACAGATGAAG CCAAAGATGA CACAATGTAA 720
TGCAAGGAAA CAAGCCTTCA AAAGCTTGCA TTGTTAATAT TTTGGCATTG TTTTTCTGAT 780
GGGCTGAAAC ACATTATGAA TAAAACAAGT CTAGATGATG CAAGAGAATG CAACTGATCA 840
AACGCAAATT TCAAGTCTTG TTTGTTTCCA TTACATCCAC AGTGCCAGTT TTAGAGGTTA 900
CTTTTCAGTC TTTATTAGGG CAACCTGAAG 930
|
