Tag | Content |
---|
EnhancerAtlas ID | HS095-23648 |
Organism | Homo sapiens |
Tissue/cell | HMEC |
Coordinate | chr5:16574350-16576050 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXC1 | MA0032.2 | chr5:16575241-16575252 | ATATTTACATA | - | 6.62 | RREB1 | MA0073.1 | chr5:16575096-16575116 | GGTGTTTGCTTGGTTTGGGG | - | 6.41 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_04197 | chr5:16573966-16575951 | Brain_Anterior_Caudate | SE_04891 | chr5:16573944-16576388 | Brain_Cingulate_Gyrus | SE_06170 | chr5:16573760-16576222 | Brain_Hippocampus_Middle | SE_06950 | chr5:16573968-16576490 | Brain_Hippocampus_Middle_150 | SE_07854 | chr5:16573949-16576072 | Brain_Inferior_Temporal_Lobe | SE_63427 | chr5:16560239-16597423 | NCI-H69 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr5 | 16574929 | 16575914 | chr5 | 16575009 | 16575848 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH05I016574 | chr5 | 16574254 | 16576168 |
|
Enhancer Sequence | GACTGGCAGA GAGACAAGAT TGGGGAGATA GGATCAGGGA AGACTGTGTC AAGCAGAATG 60 CGCAGTAAGT CTTATGCTAC AAACAATAGA GAGAAAGTCA AAGGTATAGA GCAGGGAAGT 120 GAAATGATGG GTGATTTAGG GAAATGTCTG AGGGCAACAG GAAGGATGTG ACGGGGTAGG 180 GAGGAAGCAT GGAGTCCAGA CCACCTACTA GAAGGTCATG CAGTATGTTT GGTGAAAAGC 240 AGATCAACAT GAGATGCTGG GTGACGTGGT GGGTAGAGCC CTCCACCAGA AGGTGGCCAA 300 CCCAAGCTCT CACTGGTTCA AATGCTGTTT GTATGGCCTG GGCCAGCAAA ATGAGCAGGT 360 GGACTAGGTC AGTGTTTCTT AAATAACAGT CTGCAACTGC TGCCAGGTTG GCTGCCTGGA 420 AAACTTGTTA AAATGTAGAT TCCCAGGCCC CAGGCTCCTC CTCCCAGGCC CCCTGAAACA 480 GGTGGTTTGA TTACTAGTAT TTGCATCTAA TAAATATTTA TTGATTGCCT AATTGCACCA 540 AGCACTGTGC TACCAAAAGG GAGTGGTGAA TTAGGAGCAT AGAAAGATGG AACAGACATA 600 AAAGACACAA GTTACAGAAT AAAATGCCGC AGTCCATGTC TTTAGCAACA ATCATTTGTT 660 CCTCCACTAA ATTTGTCCCT CCCCTAAGGA GCCACCACTT GCTCTATTTT TGTAGCTCTT 720 GTTTGTTTTA AGCAAGGTTG CATTCTGGTG TTTGCTTGGT TTGGGGCCAG CCTCCTCACT 780 CTCAATTCAG GATTCATTCT TGCTCTTGTT CATGTGCTGG GTGCTCCCAG TTTTCCCGAC 840 CTCACGTTGA AGTGGCAGAT TTCATAGTGA CCCACAATAA GAAACTCATT TATATTTACA 900 TACATATAAA TGAAAAACAA GTTTTGAAAA ATATTTTCCT TACAATTCAT AATGCAGTTC 960 AACTTTTTCC ATTCAATTCT ATTACGCGTT TAAATGCTGA CTGTGAATCA CTCGCCTGAC 1020 TCAGGGCCCA CTAATGAGCT GTAATGCGCA GCTCGGCTCA CATGGCATGA GACAGAACCT 1080 GCAAATGTTC GAACAGCATG CTTCCTTAGA ATGGCTTTCT TTGCAGGGTC AGGCAAAGCC 1140 CTAGCACAGA CAGAAAGCTC CCTCAAGTTT AAAAGTCTTT GGAGCTGGCC AGGAAGCCAT 1200 TTAAGCATCT TTTCAAAACC AATGAAATGC AAAACCAACC AAAGCACAAA GGCCATTAGT 1260 TATTCTCTTA GTGGAAGTTA CAAACTTCCA AGAATAATAA AAAAGAAAAT TAGGTAATGC 1320 CAGGACTGCA ACCCACAGGC CTGGCTGCCA GACTTCATTT GGAAGGCATT GCCACAGCAA 1380 CTCCAAAGAG CACTCGGGAT GTCTGTCTAT TCTGTCCTGG GCAAGGGCCC AGTTGGCATA 1440 TTGGCCAAGG TCTTGTTGGT CATCGAGAAT CCTCGGTCCA CTGAGAAGAC AAGCCCAGCA 1500 ATTGCTTAGC AAGGTAATGC CAAACTGTAT GGGACTACAT ATTTGATTCT TTGGTGGGTT 1560 AGTGTCATAT AAACATGTTT GAGAAACGAA ACCCTAAGAG AATAATCTGT ATTTAGAAAA 1620 ATCTGAGCAC TTTTGGTACT TTAATTATTT ATAATGTTTA AGATGATTTG TCTCAGGGCT 1680 CCACTTCAAA ATATGTAGCT 1700
|