Tag | Content |
---|
EnhancerAtlas ID | HS095-12890 |
Organism | Homo sapiens |
Tissue/cell | HMEC |
Coordinate | chr17:49030890-49032630 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr17:49031054-49031075 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 | Myod1 | MA0499.1 | chr17:49031795-49031808 | TGCAGCTGTTCCT | + | 7.34 | TP53 | MA0106.3 | chr17:49031781-49031799 | GACAAGCCCAGACATGCA | + | 6.37 | TP53 | MA0106.3 | chr17:49031781-49031799 | GACAAGCCCAGACATGCA | - | 6.54 |
|
| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_00952 | chr17:49030867-49035094 | Adrenal_Gland | SE_04178 | chr17:49031015-49032189 | Brain_Anterior_Caudate | SE_05235 | chr17:49030956-49032312 | Brain_Cingulate_Gyrus | SE_06067 | chr17:49030165-49035186 | Brain_Hippocampus_Middle | SE_23191 | chr17:49031126-49031896 | Colon_Crypt_1 | SE_23784 | chr17:49031665-49031984 | Colon_Crypt_2 | SE_26011 | chr17:49032143-49033783 | Duodenum_Smooth_Muscle | SE_26691 | chr17:49030919-49033447 | Esophagus | SE_29967 | chr17:49030933-49033704 | Fetal_Muscle | SE_37666 | chr17:49025326-49036503 | HSMMtube | SE_47468 | chr17:49031102-49031460 | Pancreas | SE_48151 | chr17:49023159-49034340 | Psoas_Muscle | SE_49193 | chr17:49032258-49033530 | Right_Atrium | SE_51156 | chr17:49018220-49035057 | Skeletal_Muscle | SE_54412 | chr17:49030869-49034362 | Spleen | SE_54634 | chr17:49031082-49034752 | Stomach_Smooth_Muscle | SE_57824 | chr17:49030927-49033111 | VACO_503 | SE_59738 | chr17:48979175-49044314 | Ly4 | SE_65373 | chr17:49030870-49033427 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr17 | 49032200 | 49032260 | chr17 | 49031200 | 49032200 | chr17 | 49031092 | 49031200 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I050953 | chr17 | 49030850 | 49033890 |
|
Enhancer Sequence | AAAAATTAGC TGGGTGTGGT GGTGTGTGCC TGTAGTCCCA GCTGCCCGGA GGGCTGATGT 60 AGGTGGATAG CTCCAGCCTG GGAGGTTGAG GCTGCAGTGA ACTATGATTG TGTCACTGCA 120 CTCCAGCCTG GGCGACAGAG GGGAGACCCT GTCCCAAGAA ACAAAAAAAA AAAAAGAAAG 180 AAAGAAAGAA AGAAAGAAAA AGTGGGCTCT GGAAGGAGCC AGCCACCGTT GCCCTCTGGG 240 CACTCACCAT CTCACCCCTC AGGCTCCAAC AGGGTTCCAC GTGACCAATC CCCGAGGGGA 300 GAGGAGACTG CGGAGAGGAT GGGAGGCAAA GCACCTCCTT CAAGCTCCAG GGAGGCAGGA 360 GGATTTGTTT AGGAGTGGCC CTGTGCAGAG GTAGGGGCAT GGCTGAGAAC ACCTTGGGAG 420 GTGGTGTGAA GCTGAGTCCA GGAGCCGCCA GCCCTCCCTG CCACTCAGCT CAGGGGTCAC 480 TTGGGTAGCT TCAGCCTCAA CAGCCGTGGA GTCAAGTGTC TCCTCTACAA AAATAATTCC 540 CAAATAAGTC ACTGCCTTCA CCCCTGGGAC TGGCTGGTGC ACCCAAATTG GAGTCGCCAC 600 CCAGCCCCCT TGAGCATTGC CTTGCTGGCT GATCCAACAG AGGCAGAATT AGCTGATGAG 660 GCTACCACAG CGGGAGGGAA CTGACCTGAG GCCGCCTGGA GAGATGGGAC CCCGAGGGCC 720 CTTTCTGGCA CTACTCACTT GTTGGGTCTG GGGAATTAAA ACACACTCCC CCTCTCTGGG 780 TCTCAGTTTA ACAGGGAGGA GACCACCACC TTCCAAACCT CAGTGACGGC ATCAGGCTGG 840 GGGTGGTGCT GGGCCTCCTG CGTCTGTGTC TGGAGACGCA GCTGACTCCC TGACAAGCCC 900 AGACATGCAG CTGTTCCTGC AGAGGAAGCA GCAGGAACTG GGGAAGGGCA GAGCGCTGAG 960 GGAGGGGCAA GAGGGATGCA AGGACACCAC AGTGACCGCG TGCAGCGAAG CGAGTATGAG 1020 CAGAGTCCCA ATCTCCAGGT CCCCTCTCCG CGGAAGCACT TTTGTCTTTA TTGGAAATTT 1080 CCTCCCATGT AACATCTGAC CTCTACCTTC TCTTCTACAG ATGAGCTCTG CTGTGAGTCC 1140 CAGCGGGCTG AGACACTGTG ACTGCCCACC TGTCCCCAGG TGCCCCTTCT ATACAGCCCC 1200 ATCCCTTCCC AGGGATGCTC AGTGGCTGCG GCCACCCTTG CTTTCTGCCA CTCAGCCCTT 1260 GCAGGGGCTT CACACCCCAA GAGGGGCAGT CTGGGCTGGG GCTCCTGGAC TCCCTAAGGC 1320 ATTATCCCAT CCCCGCAAGT TGCCCGGCCG GGCCCTGAAG GAAAGGGGCC CCGGACCCAG 1380 ACCCGAAGGC TGCTCACCAG AGGCTCTGCC CAGGGACTCT CACCTCTCCA GCCACTCCAA 1440 CTCCCCTCCG GCTTTCCTGT CATTTCCTGA TGCCACAAAT CTTCTGACAT CCTCCCTCTT 1500 CCCCAGTGAA TTTCTTCCCC AGGCCCTTCC CTTCCTCAAC CTGCTTCATA CTGGACATTC 1560 CCAGCTGGTA GGATCTGCCT GTGGCTCTGC ACAGGAGGCT GGGCAAGGGT GGAGAAGACT 1620 GGGGGAGCTG TCTCCCATGA CCCCAGCAGA GGCGAGAGAC AGAAGCTGCA TCTGGGACCT 1680 GTCGGCTGCA GTTTTGGGCA TTCATACCCA CCTAAGCATT CTGGAACAGC CCTGAACCTG 1740
|