EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-43369

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr9:107900160-107902110

Target genes

Number: 8
Name	Ensembl ID

RP11	ENSG00000235248
NIPSNAP3A	ENSG00000136783
NIPSNAP3B	ENSG00000165028
ABCA1	ENSG00000165029
7SK	ENSG00000201583
FSD1L	ENSG00000106701
RALGAPA1P	ENSG00000229419
FKTN	ENSG00000106692

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MYCN	MA0104.4	chr9:107900160-107900172	GGCCACGTGGCC	+	7.22
MYCN	MA0104.4	chr9:107900160-107900172	GGCCACGTGGCC	-	7.22
SOX10	MA0442.2	chr9:107900857-107900868	AAAACAAAGAA	+	6.62
Sox3	MA0514.1	chr9:107901075-107901085	AAAACAAAGG	-	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH09I105138

chr9

107900621

107901338

Enhancer Sequence

GGCCACGTGG CCACTCTACA CTCCTTTTTT TTTATGAGAT GGAGTCTCAC TCTCTCTGTC 60
ACCCAGGCTG GAGCACAGTG GCACAGTCTC GGCTCACTGC AACCTCCCCC TCGTGGGTTC 120
CAGCAATTCT CCTGCCTCAG CCTCCTGAGT AGCTGGGATC ATACATGCGC CACCACGCCC 180
AGTTAATTTT TGTATTTTTA GTAGAGACGG TGTTTCACCA TGTTGGTCAG GCTGGTCTCG 240
AACTCCTGAC CTCGTGATCC GCCTGCCTCG GCCTCCCAAA GTCCTGGGAT TACAGGTGTG 300
AGCCACCGCG CCCGGCCACT GTACACTCAT TAGAGACCAG AATTCAAGCA TCTGTGTGAG 360
GTTGGATATG TAATTGTCAA AGTCCTTTTC AACCTTGAGA CTCTGAATTT TAATTGAGAG 420
CATTAAAAAT CTTGTTTTAG ATCCAATCAC TCCTTTGCCA GCATGGAGCA AGTCATCCAG 480
GTGTCAGTTG CTTCATCTGT GAAACAAAGG GTCTTTGTCT GAGGCCAGGG TTGTCATCTG 540
ATGCTGGGTC ACAATCTCTA GATCCCCTTG GGGTCCCGCC CAACAGTGAC ATACTCATGC 600
CCTATTCTTT CTCTTTATTG AGAAGGAAAT AGTATAAGCA AACAAAATCA TCAAGAGTTG 660
CTTACATATG CACACAGAAC ATGCACCAAA CAGCTGGAAA ACAAAGAAAG TAGGTGAAAG 720
GTGAAGTTGT TTTGCTGAAT GGGTGTCAGA GGTTGGTTTA CAAATCCACA GGGAGGACCA 780
GAGCTCCGCT GATGCTAACA CTTGCTCTGA AAAATCTGTT CGCAGAACTC CTAGCGGCCC 840
CGCCTCCCTC CCCACAGCTG GCTTCTTCTG AAAGGCCTAG AGGCAACTAA AGTCTGAGTT 900
TTTATGTTTT GTAAGAAAAC AAAGGGAAGT CTAAAAATGT AAAAAAAGAA AAAAGAAAAA 960
ACCTTCAGCT GTTCCAATGT AGCCCCACGA GATTGGTTTC TCTGAACTCT GACGGGTCTT 1020
GTTGTTTTGT GTGTTCCTCA GAGCCCAAAG AAAACCAACT CCAGGCAGGG TGCAGTGACT 1080
CTCGCCTGTA CTCCCAGCAC TTTGGGAGAC CAAGGTGGGT GGATCACCTG AGGTCAGAAG 1140
TTTGAGACCA GCCTGGCCAA CATGGTGAAA CCCCATCTCT ACTAAAAATA CAAAAAACTT 1200
AGCTGGCCGT GGTGGCAGGC GCCTATAGTC CGAGCTACTC AGGAGGCTGA GGCAGGGAAA 1260
TTGCTTGAAC CCAGAAGGTG GAGGTTGCGG TGAGCCGAGA TCACGCCATT GCACTCTAGC 1320
CTGGGCGACA GAGACTCCAT CTCAAAAAAA AAAAAAAAAA AAGAGAAAAC CAATTCCATT 1380
TTCCTCTTTC TTCCTGGTGT TGAATGACAA AGGGAAGCTA AGGGGCGTTT TCTTCTATCT 1440
GGCATACTTT GCAATGTAGA ATAAAATAAC TTTGAGTTGT GGTCGCTTCT TGAGGTGACC 1500
CTCCACCCAT CCTCCAGGCA AAATATCACA AAGACCAACA AAACCTGAAA CTGAGAAAGA 1560
TACAGAGCTG ATTCCCTGGC TGACTCAACG CCCTGAGACA GGCACTCGCC TCTGAAACCT 1620
TCAGGGCTCC TCACTAACTG CAAGACCATG CTCACTGCTC ATGTTTGAAT GAAGTATACA 1680
AATTCAATAA GCAGTCTATC ATTTTTGGTG GAGTGACAAG GTCTATTGTT CCCTTGGTGC 1740
TGTGTCTCTT TCCATAGAGG CTATAACTTT AACCTACTAT AAGGTTAGTT GGTCCTGTCA 1800
CTGTAATTTC TTTGTGTCTA TTTTAGAGAG AACCGACCAT GCTTGTGTTA TTTGTAGTGT 1860
CTGAGGCAGA GAATGGCTCT CCCCAAGCCC CAAGAACCAG CGTAGGACAG TTCTTTTTTT 1920
TTGAGACAGG ATCTTCACAC TGGCTGGAAT 1950