EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-30972

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr4:140687430-140688780

Target genes

Number: 14
Name	Ensembl ID

PPP1R14BP3	ENSG00000179967
AC024032.1	ENSG00000239545
NDUFC1	ENSG00000109390
ACA64	ENSG00000239005
RAB33B	ENSG00000172007
FTH1P24	ENSG00000249302
SETD7	ENSG00000145391
MGST2	ENSG00000085871
7SK	ENSG00000201533
H3F3AP6	ENSG00000178458
MAML3	ENSG00000196782
SCOC	ENSG00000153130
RP11	ENSG00000241923
CLGN	ENSG00000153132

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf1	MA0493.1	chr4:140687752-140687763	GGCCACACCCA	+	6.62
MEF2A	MA0052.3	chr4:140688547-140688559	GCTATTTATAGT	-	6.11
MEF2B	MA0660.1	chr4:140688547-140688559	GCTATTTATAGT	-	6.74
YY2	MA0748.1	chr4:140687837-140687848	GTCCGCCATTT	+	6.14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH04I139766

chr4

140687755

140689092

Enhancer Sequence

TTCTCCTGCC TCAGCCTCCT GAGCAGCTGG GATTACAGGC GCCCACCACC ATGCCCAGCT 60
AATTTTCATA TTTTTAGTAG AGACGGGGTT TCACCATGTT GGCCAGGCTG GTCTCAAACT 120
ACAGACCTCA GGTGATCCAC CCACCTTGGC CTCCCAAAGT GCTGGGATTA CAGACGTGAG 180
CCACCGTGCC CAGTCACGAG TGATTTTTTT AAAGCTCTAG ATGCCAAGGT AGTGTCAATG 240
AGGGGAACTG CCAACAATTT CTGGTTCCTT CAATAAACAA CCAGAAACCA TGACAGAATA 300
GGGCTTGGCA CCTATGGTAA CCGGCCACAC CCAGCTGCTT TCTCTGGAGT ACAGCAATAG 360
AATGGACAAC GGCTCAGATC TTCTCCTTCT TCTCCCGACA ACTCCAAGTC CGCCATTTCC 420
TTCTACCATG ATTTAGAAAT TATCCCCTCT ATTTGATAAA GAGGTAAATT AAGTCAAGGG 480
AAGGTAAAGG TTCTGGCATC TGGGCACTCG GCACATGAAG AGCAAAACTG AGAAAAGACC 540
AAGGTTTGCC ACTGCGCCAT CTCCCTGCAG ACCAGCTCTG CAGGCACGGC CATGGGGGCC 600
AGTGAATGTC ATGAGACGTT AAGTGCGAGG CTGAGCTAGT TGCCCTCTGT ATTTTGGTAC 660
CCACACATGA AAAACTGGGG GTAACAGTAT GTGTTCCTTC CCACCTCACA AAAATACCTT 720
ATCTACACAT AACAAGTATA CACGTGACTA TTATTGTCCA CTTTATTATT ATGTCAATGT 780
GATTACTCTG TAACCCAACT TATATTCCTT TGCCTCCCAA GGAAACAGAC AAAATAAAAC 840
ATGAGCACCA CAACAACTTT CCAGCGGGTA CAGGTAATTA ATTCTAACCA AAAAAGTCCA 900
CATTGGGTCA GGCCTACCAC TCAGCTATTC AGCTTGGCAC GGAATCTCTT TTGGTGGCAC 960
CAAGGGACAT GCTGACGGAT GTGTTCGTTA GGAAAGCACA GTTGTCTATG TTGATGTCAA 1020
CCTCAAATTG TGAGGGCCAC ATACCAAACC ACTGAGTTTT TGCTAACATC TCGTCACAGA 1080
TCTATCATCC ATGAAATTGG TTTAAGCTGT CTTAAAAGCT ATTTATAGTT CTGGTCTTAC 1140
CACATCTTAC ATTAATGAAA TTCCTTACGC TTATGAAACC AGCCATGTAA ATGAGTGATG 1200
CTTCCTTTTT TCTTCTTCTT GAATTTGCCT CTTTCAAACT CCATAATGGT CCTTCCGACT 1260
TTGTCTTACT ATACCAGGAT TTGGTGAACA TGTGTGTGAT ATATTACATT AATCACATAC 1320
CTGGTGATTT TGGAGTCCCA TTATAGCTCC 1350