EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-29236

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr4:1329240-1330640

Target genes

Number: 17
Name	Ensembl ID

GAK	ENSG00000178950
TMEM175	ENSG00000127419
DGKQ	ENSG00000145214
SLC26A1	ENSG00000145217
IDUA	ENSG00000127415
FGFRL1	ENSG00000127418
RP11	ENSG00000251639
RNF212	ENSG00000178222
SNORA48	ENSG00000212458
AC092535.3	ENSG00000227189
CTBP1	ENSG00000196810
MAEA	ENSG00000090316
KIAA1530	ENSG00000163945
AC078852.1	ENSG00000254094
AC078852.2	ENSG00000253399
CRIPAK	ENSG00000179979
NKX1	ENSG00000235608

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RUNX1	MA0002.2	chr4:1329315-1329326	AAACCACAGAG	-	6.14
RUNX1	MA0002.2	chr4:1329397-1329408	AAACCACAGAG	-	6.14
RUNX1	MA0002.2	chr4:1329480-1329491	AAACCACAGAG	-	6.14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH04I001337

chr4

1329850

1330624

Enhancer Sequence

AGAGTTAAGT CAGCACTGGC CCCACAGTGT GTTGAAATCA CAGAGTTAAG TCAGCACTGG 60
CCCCATGGCG TGTTGAAACC ACAGAGTTAA GTCAGCACTG GCCCCACAGT GTGTTGAAAT 120
CACAGAGTTA AGTCAGCACT GGCCCCATGG CGTGTTGAAA CCACAGAGTT AAGTCAGCTC 180
TGGCCCCCAC AGTGTGTTGA AATCACAGAG TTAAGTCAGC ACTGGCCCCA TGGCGTGTTG 240
AAACCACAGA GTTAAGTCAG CACTGGCCCC ACAGTGTGTT GAAATCACAG AGTTAAGTCA 300
ACACCTGCCC TGCAGTGTGT TGAAATCACA GAGTTAAGTC AGCACCTGCC CTGCAGTGTG 360
TTGAAATCAC AGAGTTAAGT CAGCACCTGC CCTGCAGTGT GTTGAAATCA GAGTTAAGTC 420
AGCACCTGCC CTGCAGTGTG TTGAAATCAC AGAGTTAAGT CAGCACCTGC CCTGCAGTGT 480
GTTGAAATCA CAGAGTTAAG TCAGCACCTG CCCTGCAGTG TGTTGAAATC AGAGTTAAGT 540
CAGCACCTGC CCTGCAGTGT GTTGAAATCA CAGAGTTAAG TCAGCACCTG CCCTGCAGTG 600
TGTTGAAATC ACAGAGTTAA GTCAGCACCT GCCCTGCAGT GTGTTGAAAT CAGAGTTAAG 660
TCAGCACTCA TCCCGCAGCA TGTTGAAATC AGGGAGTTAG ATCAGCACTG GCCTTGCAGC 720
ATGTTGAAAT CAGAGAGTTC CAGCACTCGT CCCGCAGAGT GTTGAAATCA GAGTTAAGTC 780
AGCCCTTGTC CTGCAGGTGT TGAAATCAGA GCGTTAAGTC AGCACTGGCC TCACAGCGTG 840
TTGAAATCAG AGACTTAAGT CAGAACTGGC CCCACAGTAT TTTGAAATCA GAGAAGTCAG 900
CACTCCCCCG ACAGTGTGTT GAAATCAGAG TTAAGTCAGC ACTCACCCCA CAGCATGTTG 960
AAATCGGAGT TAAGTCAGCA CTCACCCCAC AGCATGTTAA AATCAGAGTT AAGTCAGCAC 1020
TCATCCCACA GTGTGTTGAA ATCAGAGTTA AGTCAGCACT TGTCCCGCAG CATGTTGAAA 1080
TCAGAGTTAA GTTCATACTG GCCTCGCAGT GTGTTGAAAT CAGAGAGTTA AGTCAGCACT 1140
GACCCTGTAG CATGTTGAAA TCAGAGTTAA GTCAGCACTC ATCCCGCAGC ATGTTGAAAT 1200
CATAGTTAAG TCAGCACTCA TCCCACTGTG TGTATCAGTC AACACTTGAG GGAGTTATGC 1260
TTTGTGCTGA CCCTTAGTGC AAAGTGTGTG GGTCACTGGG GGATGGCTGT GGGCCGATGG 1320
CACCTGCTTC ACCATGGTCC ACGTTTTTAA GCTGTCCCAG GAGCTTCCCT GGGAGCATCC 1380
CCAGGACCCT CTGCTCTCTG 1400