| Tag | Content |
|---|
EnhancerAtlas ID | HS094-24397 |
Organism | Homo sapiens |
Tissue/cell | hMADS-3 |
Coordinate | chr20:43716060-43717810 |
Target genes | | Number: 12 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF2 | MA0051.1 | chr20:43716604-43716622 | GATATGGTTTCACTTGCC | - | 6.76 | | TBX21 | MA0690.1 | chr20:43716343-43716353 | TTCACACCTT | - | 6.02 | | TBX2 | MA0688.1 | chr20:43716342-43716353 | ATTCACACCTT | - | 6.02 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_10962 | chr20:43711940-43717242 | CD20 | | SE_55665 | chr20:43712155-43725637 | u87 | | SE_67641 | chr20:43712155-43725637 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I045086 | chr20 | 43714734 | 43718175 |
|
Enhancer Sequence | GAAGCCCCAA TGCCTTTTTT TTTAACATAA AAAAAATTCA TAAACAGAAT GAACGGACAG 60
CATTTCTATG ACTACGGTAA AAGACTCTCT TATGACTTGC AGTAGGGCCT AGTTCTCCAA 120
ATACCAAAGT TGGCAATTGA TGATGCAGGC TGCTGAATTC ACAGCCCTGC TGCACTTTGT 180
GAAGTTAGGC ATTAATAGGC AGTGGGATTA TGACAAGTGG AATGATCATA TGAGAGGATG 240
TGGGAGAAAA CTGAAAGCTC TCTAAAACAC TGGGTGCAAA CAATTCACAC CTTTTCTTAG 300
AGGAGAAAGC TCACAATTTT CTGCTTGCCC CATCCCTCAA GGCTACTTAG CTGGAAGGTG 360
GGGATCAGTT TGGCCTAGAG CATGACAAGT AGACACAGTA GGTAAAAATC CTGGACCCAT 420
ACAGAATTGA AGAAACTTGT TAACTGACAC CATCAAAAAT TTGGGGAAGT ATCTGTGGAA 480
ATGGATTTTT GTGGTGCTTT ATCAAGGAAG GGGGAATGTA ATCTTGGCTC AGGCTGATCT 540
TCTTGATATG GTTTCACTTG CCAGGGATTA TTTGGCATTC TCTGTGCTAG CTCCAGGAGC 600
TGGCAAGGCT CTAACAATGT GATGAGTTGG CTAATGCAAA CTTAAAACAA ATGCTGGCCC 660
ACGTGAAATG GAACTTAAGG GCCCCAAATC CCTTGGCATC ATGTAGAAGA AGAGATTCAA 720
AGATTTCTGA AAGACAGGAG GCTGGATTGG ATCTATTTTG TGCCTCCTTC CCACAAATAC 780
CTCTAACTGT AGCCCTCACA CTTTACCCTT GCTTTGAGGA AAGTCAAGAA TGCTGGGTGG 840
AGGGGCTGCA ATTTGAAATA GGTTGCCTGA TTCAGAGGGG AAGAAGAATG CAGAGATGTG 900
GGAGGCCAGG CGTTGGCACT TCATCCTCAG AAATGAAGTG GGAGTGATCA CTGGAATATT 960
CAGTAGGCTC TGTATGAGGC AAGAACTCAT GGTGTAGTGT TACAGGCCGA AATGATGAGG 1020
GTCGTGATCA ACTCCATATA CTACTGGAGG CTATATGAGT AAGCAGCAAA CTGTTTCTCA 1080
TAAATGCAGA ATGTTGGCAA ACCGACGAAC TGCATCTGCC ACCCGGCAGG AATGCTGAGG 1140
GCAGTCACGT CCCAAGCATA GTGTTTCTTG TGATTAGGTA CATCTGAAGC CTGTTAGTAA 1200
CAATATGAAC CTGTGATCAG TTAAGCAGCT GACCAATCAT TACCTCCTCC TCCCTGCTCT 1260
TGTTACCCAA TAAATAGGAA GGACTGTGGA AGCTTGGGGG CTGCCTTTGC TCACTAGAAG 1320
CGGGGAGCTC TCTTCTTCTT CCCCGGCCCC TTCCTTTAAA ATAGTTTCTT TTGTCTTAAG 1380
TTTTCATTTC TATGTTCGTC CCTTCATTCA GTCTTGTAAT GACGGTCTCA GGCAGTAACA 1440
GTAGTAAGCT GTCGTAATGA TGGTCTCAAG TAGTAACCGT GGCACACTGC CACAGTGTAG 1500
GGCCCTAAAA AGTTAAAGGC AACCCACTAA AGTCTTACTT GATTTGTTTA ACCAGCAAAA 1560
CATAAGAAAC AAAGCAAAAT GGAAACCAAA AACACCCTCT AGTTCTGGCA AAAAAAAAAA 1620
AAGTCACGAC TTGAGCCACT GTGTAACACT GGGCTTGCGT TTATTGATCT AAAGCCCTTT 1680
GATTGAAGGA TATGCTACTC ACCTTTGAGG AAGGACTCTG CTATATTGCA TGAGTGTAAT 1740
GTGAATATTT 1750
|
