EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-19605

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr19:56134910-56135840

Target genes

Number: 23
Name	Ensembl ID

PPP6R1	ENSG00000105063
HSPBP1	ENSG00000133265
BRSK1	ENSG00000160469
SUV420H2	ENSG00000133247
IL11	ENSG00000095752
TMEM190	ENSG00000160472
TMEM238	ENSG00000233493
RPL28	ENSG00000108107
NAT14	ENSG00000090971
SBK2	ENSG00000187550
AC008735.15	ENSG00000231274
ZNF579	ENSG00000218891
FIZ1	ENSG00000179943
ZNF524	ENSG00000171443
ZNF865	ENSG00000261221
ZNF784	ENSG00000179922
ZNF580	ENSG00000213015
ZNF581	ENSG00000171425
CCDC106	ENSG00000173581
U2AF2	ENSG00000063244
EPN1	ENSG00000063245
AC010525.1	ENSG00000203305
7SK	ENSG00000222524

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr19:56135507-56135517	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr19:56135688-56135698	GCCCCGCCCC	+	6.02
Pou2f3	MA0627.1	chr19:56135534-56135550	AATTATGCAAATTATC	+	6.07
SP1	MA0079.4	chr19:56135504-56135519	GAGGCCCCGCCCCTT	+	6.18
SP1	MA0079.4	chr19:56135622-56135637	CAGGCCCCGCCCACC	+	6.67
SP2	MA0516.2	chr19:56135621-56135638	CCAGGCCCCGCCCACCA	+	6.14
SP3	MA0746.2	chr19:56135624-56135637	GGCCCCGCCCACC	+	6.14
SP4	MA0685.1	chr19:56135504-56135521	GAGGCCCCGCCCCTTAC	+	6.23
SP4	MA0685.1	chr19:56135622-56135639	CAGGCCCCGCCCACCAC	+	6.38

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_68542	chr19:56135499-56168361	TC71
SE_68543	chr19:56135499-56168361	TC71
SE_68544	chr19:56135499-56168361	TC71
SE_68545	chr19:56135499-56168361	TC71
SE_68546	chr19:56135499-56168361	TC71
SE_68547	chr19:56135499-56168361	TC71

Enhancer Sequence

AGATCAAGTC ATTTTTCGCA CTCAAAACCC TCCAGTGGCT CCAAATGACT TATCCCAAAT 60
CGTCACTATA ATATCTGTGG CGATGTAGCT CCACTTATCT CTCTGACCCC AGCTTAAACA 120
TAAGCCGGCA CCCAGCTGAC TTCTCTCGTC TAAATTTAGC TGCCCCACCC CTACTCTTGG 180
CTCAATTTAT AGAAATTGGC TCAATTTTTA TTTCCTTTAT AGAACATATC ACAGTAACTC 240
TCCTTTATTG TCTCTCTCCT CTCAAGAGAC TGCAGGCTCC AAAAGAACAC AACCCTTGTC 300
TGTCTTGGTC ACTTCTCTAT TTACAGAGCC GAAGTAGGAG CTCAGTAAAT GTTTGTTGAA 360
TGAATGAATG TCCTCAATTA GTCTAATTCT GAGTGGGGTA ACGTGGAGGA AGTTCCAAAG 420
TCACCTAGAC CACCCACTTC TACCCCCAAA TTCTCCCTTG GGCATTCGAG AAGCATCACT 480
AAGACCCTTG AAGAATTATC CCCTACCCCG ACATAGGTGC TCCAATCATA ATCCCCCACG 540
TTTTTCAGGG TCACCTTCCC AACCTTCTAC CCTAGAATTA GCCCTAGAAT TTATGAGGCC 600
CCGCCCCTTA CAAGGCTCCA CCCAAATTAT GCAAATTATC CCTGGTAAGC CCCCTTCCCT 660
GGACCCAAAC CCGTCCCACA AGACAACACC GTCCTCAGAC TCCGCCCCCA TCCAGGCCCC 720
GCCCACCACC CATAGGTCCC TCCCCCACCC CGCCCACCAT GACATAGTCT CCTCCCCTGC 780
CCCGCCCCTC GCGAAACCAC AAGAAGCCCC ACCCCCAGGG CCATAGCACT AAATACCTCC 840
CTCGCCCACC CCCTCATAGG CCACGCCCCG GACCCGCCCC CCACACTACG ACCTCCTCCC 900
ACCTCGAGCC CCACGCCCAG GCCCCTTCCT 930