EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-19463

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr19:47693220-47694150

Target genes

Number: 20
Name	Ensembl ID

AC011551.1	ENSG00000249210
CALM3	ENSG00000160014
AC093503.1	ENSG00000243560
Y	ENSG00000222614
FKRP	ENSG00000181027
STRN4	ENSG00000090372
SLC1A5	ENSG00000105281
AP2S1	ENSG00000042753
ARHGAP35	ENSG00000160007
snoU13	ENSG00000252071
NPAS1	ENSG00000130751
SAE1	ENSG00000142230
BBC3	ENSG00000105327
PRR24	ENSG00000257704
C5AR1	ENSG00000197405
DHX34	ENSG00000134815
MEIS3	ENSG00000105419
NAPA	ENSG00000105402
GLTSCR2	ENSG00000105373
SNORD23	ENSG00000221803

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

JUN(var.2)	MA0489.1	chr19:47693483-47693497	ATGAGTCATCTTTT	-	7.58
KLF5	MA0599.1	chr19:47693622-47693632	GGGGCGGGGC	-	6.02
MAFK	MA0496.2	chr19:47693478-47693497	ATTTGATGAGTCATCTTTT	+	6.32
NFE2L1	MA0089.2	chr19:47693479-47693494	TTTGATGAGTCATCT	-	6.26
NFYB	MA0502.1	chr19:47693822-47693837	CTGATTGGCCCCCTT	-	6.05

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_34491	chr19:47689593-47695832	HCT-116
SE_37541	chr19:47692533-47695145	HSMMtube
SE_38641	chr19:47691440-47695218	HUVEC

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I047185

chr19

47688934

47694994

Enhancer Sequence

ATTATTTTGT AAAGGTGGTT GTATATTCAC ATATCCACAG TTTTTTCTAT AAATAACGTG 60
AAACCGTGCT TGGTTTCTCT TTTCCAAAGT TTGCCTTTTC CATTACATGG GCAAGTCCTG 120
AACCTAAGCC GAGACACTAG TCCATCATCT CCAGCAATGA ATGTCATCCC CCCAGACTTC 180
AGCATCCTGA GTTAATTAAA AGGTGCAGAT GAAGTTAATC AAGTTTGGAA CTCTAATTTT 240
GTGCAGTGTT TTGATACGAT TTGATGAGTC ATCTTTTGGT AGAGCACCTC TCTATCCCTG 300
ACAGTGTTTG ATCTTAACGG AACAGTTTTA TAATGTGTAA ACTGGTGGGA GGTGCTCTTC 360
AGAAATGCAG TCAACAGTGG TATGTGTGCG TGTTTGGCTC TTGGGGCGGG GCGGAAAGCA 420
GAACAAAGGA GAATTTAATA AGCGAGAACT TGTCAGGGGC TAGGGTCAGT TCTGAGGCTG 480
CTGCCTGTCA AGAACATGGC TTTCTTCCTG CCCCCCTCCA CTGCTGCTAA CTGGAGTCTG 540
ACCTTCGAGA AAGAGTGAAA AAAGACAGCT TCTGTTTGTT TTGCTGCAAG TAAGTGGCTG 600
GACTGATTGG CCCCCTTCCC AGAGGCCCTG CAAGGACTTC AGATGTGGTC AGCGAGGTAT 660
GTGGATGGTG CCAGCCTGCC GGCCCTCGTC CAGCCAAACT GCACCAGGAA CAGGCAAGGG 720
TCCCAGAGAA ACAGCGGGGT CAGCTGCTGC CGCCTTTGCT CCTGCTCTTA ATGCTGTCCT 780
ATTTCTTCCT AAGAGGAAGC TGGTTTACTC TCTCAAGATT GATGGGCAAA GTTTTATATG 840
ACCACGGTCT CCACTTCTCA CCCACTGAAC TTACAGCTTG AAATTAACAG AGGCGAGGCC 900
CATCTGGAAA AATGCATTTG ACAAAAACTT 930