EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-12017

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr13:115029650-115030620

Target genes

Number: 8
Name	Ensembl ID

GAS6	ENSG00000233695
LINC00452	ENSG00000229373
RP11	ENSG00000260910
RASA3	ENSG00000185989
CDC16	ENSG00000130177
UPF3A	ENSG00000169062
CHAMP1	ENSG00000198824
AL845154.2	ENSG00000229723

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr13:115029855-115029867	ACTAAAAATAGA	+	6.27
MEF2B	MA0660.1	chr13:115029855-115029867	ACTAAAAATAGA	+	6.32
MEF2C	MA0497.1	chr13:115029853-115029868	CTACTAAAAATAGAA	+	6.57
Nr2f6(var.2)	MA0728.1	chr13:115029804-115029819	GAGGTCAAGAGATCG	+	6

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_43712	chr13:115023530-115030122	MM1S
SE_46074	chr13:115027672-115032329	Osteoblasts
SE_67415	chr13:115023530-115030122	MM1S

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH13I114262

chr13

115027869

115031929

Enhancer Sequence

TTTTCTAGTC CTGTATGATC TTTTAAATAT GTATATTTGA GTATTGTATA ATTTACCTTT 60
CTTCTGAGAT CTGATTAATA CAGAAGGCTC AGCTGGGCGC GGTGGCTCAC GCCTGTAATC 120
CCAGCACATT GGGAGGCCGA GGTGGGCAGA TCATGAGGTC AAGAGATCGA GACCATCCTG 180
ACCAATATGG TGAAACCCCG TCTCTACTAA AAATAGAAAA ATTAGCTGGG CATGGTAGCA 240
CATGCCTGTA GTCCCAGCTA CTAGCCCTGC GCCCGGTCCC AGGCTGAGGT AGGAGACTTG 300
CTTGAACCCG GGAGGCGGAG GTTGCAGTGA GCTGAGATCG CGCCACTGCA TTCCAGCCTG 360
GTGACAGAGC GAGACTCTGT CTCAAAAAAA AAGGAAAAAA ATACAGAAGG CTCAGAGAAC 420
TCTGTATGGA GATAGAACTT CTTTTTTTTC TTTTGAGATA GTATTTTGCT TTGTCGCCTA 480
GGCTAGAGTG CAGTGGTACG ATCTCGGCTC ACTGCAACCT CCACCTCCCA GCAGTTTTCC 540
TGCCTCAGCC TCCAGAGTAT CTAGGATTAC AGGCACCTGC TACCATGCCT GGCTAATTTT 600
TGTATTTTTT ATTAGAGACG GGGTTTCACC ATGTTTTGGT CAGGCTGGTC TCGAACTCCT 660
GAGCCCAGGT GATCCACCCG TCTAGGCCTC CCAAAGTGCT GGGATTACAG GCATGAGCCA 720
CTGCGCCCAG TCGAGATAGA ACTTTTTAAA AAATCTTTTT TGGGGTAGAT TTCCAGCATA 780
AGAAAATAGA ATAGTGTGAT GAACCTCCAT GACCCATAAC CAACTTCAAC AATCTTTGGT 840
TCATGGCCAG TCATGTAGCT ATGTCTGGCC ACTTCCCCCA CCCTGGATGC CCTGGAATAT 900
TTTGAAATGA ATCAGTGTGG TAAGAGAAGG AAATATGTTT TCTTTTAATA ACCATGCTGA 960
ATCTTTTATG 970