EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-03984

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:240549260-240550900

Target genes

Number: 6
Name	Ensembl ID

RP11	ENSG00000215805
RPS7P5	ENSG00000217327
FMN2	ENSG00000155816
ADH5P3	ENSG00000223694
GREM2	ENSG00000180875
Y	ENSG00000199241

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr1:240550654-240550665	AAGAGGATTAA	+	6.14
FOS	MA0476.1	chr1:240549540-240549551	AATGAGTCAGA	-	6.32
Mecom	MA0029.1	chr1:240550724-240550738	TATTATCTTATCCC	-	6.12

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I240385

chr1

240548726

240550649

Enhancer Sequence

CAGGTTGACA TTTTATGCCT CAAATGCTCT CTTTCTTCCT CCTAGGAGTA TTCCACAACA 60
TTGTTTTATT GTCCTAAGAA CATGCACAGC ATAGAGAAGG AAGATGCATT GGGACTTAGT 120
TATTTCTCTT GCAGTCTAAG GAAAGATATT CTGAAAGTCA TGCACTGTGA CATGTATGAA 180
CTACTTAAAT TTACCTGACT TTTAGTTCAT TGTCAAAAGG AAGAGTGTGT CAAAAATCTC 240
AAAACTAAGG CAATATATCT TCAGTTAAAT GACAACTTTA AATGAGTCAG AAGAAAGGCA 300
CTGCATCTGT CTAAAAAATA TCCCATACTG GCTGCACTTA AAAGCAACTG GAATGCACAT 360
TCATAGCTAA TTATAAACAA AAACTAGTTA ACACTTTAAA TAAAAAGGAA AAATAGCAAA 420
AAGATTTAGA GCCTAGACAA ACAGATGAAA GGGTTCTGAG TTGCCTTCCA TCTGATATTA 480
CTCAAATGCA ACTCTGTCTC CAATTACCTG GGAATATGTG GTATTCCCTC ATGAAAGCTC 540
AAGATCAGAA AGGGCGTCCA TTTCGTGTCT TTGCTTACTC ATAGCCATTT GGAACAAGTT 600
CAGCAGAAGT ATTTCACATT GCGAAAGAGT CTGGAGCCAG ACAGCGACTA CAGACACTAA 660
TCACTGGGTC AAAATAGTAA CTTAGTAGGA CAGCAACCAC CAGAAAGTAT TTGTGGAGGT 720
AGAAATGTGG AGTCGGATAT ATTAGTGCCG TTGGAGAAGA TATCACCAAA TGCAAAAATG 780
CTGTAACAGA ACCATTAAAT CACTATTTGT AATCAGTTTC ATGTTCAGTG GCACAGGACT 840
GTCTGAGCCG ATGGTCTCTT TGGTAGGATC AGACCTAAAA GGTAATCTTA TGCCCTTAAC 900
TCTAGAATAA ATAGATGGAA AGAGAATTAA CCAAATAAAT AAAGGCTGCC TCCTAAAACA 960
TTTGGTGTTT CTTTTATTGT ATGGTTCCAA GTACAGGCTT TCTTTGCCTC AAACTGCAGA 1020
TCTCTAGCAT TTGAGATTTG CGGGGTGGGC AAAAGGGGAA ACATCATTGC TAAAATAATA 1080
GGTGCAGCAA TTGATCAACT TCCCTAAGGA GCTGCAATTT TAGGTCTATT CAAATAAGAG 1140
TTACTGGTAT TCTCTGAATA TTGTCATTAT AAACCACTTT TCATTGTTGC CTTTTTTCTT 1200
AAACTACATC ATCCTGTTCC TTTCCTCCAG TGTCAGTAGA GAATTGATTG CTTTATTTTA 1260
CTATCACTCT ACTCCGCTAC TACTTCTATT TTCAGTAGAC TCTATCTCGG AACATTTTCC 1320
TTGGCAGTGG ATCTCAAACT CCAAGCTATG AATAATTACC CACAGTATGT TTGGAATAAA 1380
AAGGTGAGCT TTAGAAGAGG ATTAAGCATT TTTTAAAAAT CATTCTTTTA GATTTCATCA 1440
GGTTCTCACT AAATTCACAT GAAGTATTAT CTTATCCCTT GTAGCAATTT TATTTACTGC 1500
TATGTCTTTA AAAAGTGGGG AGGGGACTAA GGAGCTATTA GCCTCTGTGT TTATCCTGTA 1560
GGCATTGGAC TTCTCCATTC TATGCCAATT AAAACAACTT CACACACAAA TTAAGTAGAA 1620
ATAAAATCTA TTAAATATAT 1640