EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS094-03759 
Organism
Homo sapiens 
Tissue/cell
hMADS-3 
Coordinate
chr1:226889520-226891830 
TF binding sites/motifs
Number: 9             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
ALX3MA0634.1chr1:226890605-226890615TCTAATTAAA+6.02
BHLHE41MA0636.1chr1:226891308-226891318GTCACGTGAC+6.02
BHLHE41MA0636.1chr1:226891308-226891318GTCACGTGAC-6.02
DUX4MA0468.1chr1:226890311-226890322TAATCCAATCA+6.02
IRF1MA0050.2chr1:226890106-226890127AAAAAAAAAGGGAAAGTTCAA-6.03
USF1MA0093.2chr1:226891307-226891318GGTCACGTGAC-6.14
USF2MA0526.2chr1:226891304-226891320GCCGGTCACGTGACGG+6.15
ZNF263MA0528.1chr1:226889643-226889664CTCCCTCCTCCTTCCTCCCCT-6.58
ZNF263MA0528.1chr1:226891201-226891222CCCCCACCTCCTCTCTCCTCC-6.92
Number of super-enhancer constituents: 48             
IDCoordinateTissue/cell
SE_00103chr1:226889060-226893178Adipose_Nuclei
SE_03159chr1:226890055-226891960Brain_Angular_Gyrus
SE_03869chr1:226889349-226893050Brain_Anterior_Caudate
SE_04801chr1:226888209-226892798Brain_Cingulate_Gyrus
SE_05781chr1:226888049-226892389Brain_Hippocampus_Middle
SE_06710chr1:226889242-226892390Brain_Hippocampus_Middle_150
SE_07746chr1:226888913-226892972Brain_Inferior_Temporal_Lobe
SE_08795chr1:226889445-226889799Brain_Mid_Frontal_Lobe
SE_08795chr1:226890266-226890508Brain_Mid_Frontal_Lobe
SE_08795chr1:226890597-226891091Brain_Mid_Frontal_Lobe
SE_10211chr1:226890007-226892112CD19_Primary
SE_10887chr1:226873819-226893407CD20
SE_11833chr1:226890100-226891304CD3
SE_11833chr1:226891325-226892398CD3
SE_13607chr1:226890004-226892378CD34_Primary_RO01536
SE_14432chr1:226890267-226892206CD4_Memory_Primary_7pool
SE_15456chr1:226890195-226891995CD4_Memory_Primary_8pool
SE_15808chr1:226890297-226892105CD4_Naive_Primary_7pool
SE_16345chr1:226890472-226892567CD4_Naive_Primary_8pool
SE_16856chr1:226890110-226892221CD4p_CD225int_CD127p_Tmem
SE_17296chr1:226887872-226908646CD4p_CD25-_CD45RAp_Naive
SE_17765chr1:226887869-226893077CD4p_CD25-_CD45ROp_Memory
SE_18263chr1:226887975-226903974CD4p_CD25-_Il17-_PMAstim_Th
SE_19160chr1:226890004-226892711CD4p_CD25-_Il17p_PMAstim_Th17
SE_20012chr1:226889957-226892254CD56
SE_21455chr1:226890073-226892303CD8_Naive_7pool
SE_21910chr1:226889098-226892688CD8_Naive_8pool
SE_22315chr1:226889193-226893095CD8_primiary
SE_25774chr1:226888100-226893183Duodenum_Smooth_Muscle
SE_26570chr1:226889267-226891978Esophagus
SE_29606chr1:226889178-226892079Fetal_Muscle
SE_31634chr1:226889239-226891913Gastric
SE_40782chr1:226889189-226891993Left_Ventricle
SE_42228chr1:226889214-226891900Lung
SE_48218chr1:226889290-226891900Psoas_Muscle
SE_48643chr1:226889324-226891854Right_Atrium
SE_50140chr1:226889292-226891914Sigmoid_Colon
SE_51367chr1:226889193-226892316Skeletal_Muscle
SE_52562chr1:226889223-226891918Small_Intestine
SE_53341chr1:226889211-226892093Spleen
SE_54498chr1:226888025-226894921Stomach_Smooth_Muscle
SE_55112chr1:226889333-226889834Thymus
SE_55112chr1:226890147-226891818Thymus
SE_58303chr1:226819953-226937809Ly1
SE_59629chr1:226819233-226928465Ly4
SE_60416chr1:226819368-226929640DHL6
SE_61009chr1:226812849-226900772HBL1
SE_62233chr1:226813614-226929647Tonsil
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1226890865226891416
Number: 1             
IDChromosomeStartEnd
GH01I226701chr1226888703226892578
Enhancer Sequence
CTGCAGATGT CATGATGACT GAATCCTTCT GACTCCTTGT CAGCATCAGC ACTCCCTAAT 60
TCTGCAGAAT AACTGGTACC AAATAGCCAT TTCCTGCTCA TTCACGGCTC CCTTAACAGA 120
AAACTCCCTC CTCCTTCCTC CCCTAAGTCC CATGCACACA CAGAGAGGGA ATCAGAAAAG 180
GCAGGAAATG CTTGCCTAAG ACCAGAGAAA ATGCCAGGGA AGAGAGAGAC AAGAAAATTC 240
CACCAGGTCT ATGTTGAGCA GGGAAATTAT TCCCCCAAGA GAAAAGTTCA ACTTGGCCCG 300
GCACGGTGGT TCATGCCTGG AATCCCAGCA CTTTGGGAGG CCGAGGTGGG TGGATCACTT 360
GAGGTCTAGA GTTCAAGACC AGCCTGGCCA ACATGGCAAA ACCCCGTCTC TACTAAAAAA 420
TACAAAAATT AGCCGGGTGT GGTGGTGGGC GCCTATAATC CCAGCTACTC GGGAGACTGA 480
GGCAGGGAGA ATTGCTTTAA CCAGGGGGGC GGAAGTTGCA GTGAGCGGAC ATCACGCCAC 540
TACACTCCAG CCTGGGCGAC ACAGTGAGAC TCCCTCTCGG AAAAAAAAAA AAAAAGGGAA 600
AGTTCAACTT GACGGCTACC CCTATTTCAT CATGGTGAGG TACAGAAAAA GGATTCCCTT 660
CTGCAGCGCT GCCTATCCTC TTCTGATGAC CTCACTGTGG CTATCTGGTT ACAAAGGCAG 720
GCAACAACTG GCACTAGGCC TAGAGAGAGA TGACCAAAAT TGACTACGCT TGCACAGTAA 780
GGGACTAGAT TTAATCCAAT CATTTGGCTC CAAGAAATGC ACGAAATACA ACTACTGGTA 840
TTCTCTTTAT TCGGCAGATG GTAATGAAGA CCCATTGGGA GGGTGCCTTC CCATTTTGTC 900
AGTCTAGGAC CTGAGTGGAG TCCCAACCGG GAAGCCTGGG GCAGTGTGCT AAACCAGCAG 960
CCAACAGATA CTGCATTCCA ATAGTGGCTT CTTGGTCCCC TGGCATTTTT TGTGCTTACC 1020
TTTAACTAAC TGTTCCTTGC CTAAGCTCCT TCCAACCTCA AGGAACTAAG AGAATTTCAT 1080
TCCTTTCTAA TTAAATATTT TTCCTCCAAT AGATAATCCA CACTGACCCT ATCGAGGGAA 1140
AATCTGAGCT GGTGTAACTG CAGGAGGTGG TTTATTTTCA TAACAGTAAA ACATCTAAAC 1200
CAAATATGCC CTGTGTTTCA GCAGCTTAAA CATTGAGGTC TGACAAGAAC CCGAGATTCC 1260
ACTTTGCCTG CCAAGGGCTA AGTGTGTATG CTGAAGCGAA AGAAAGTGAT TATGAGGAAA 1320
AATGGGGAAT GTCTGAGTGG GTGAAGGAAA AAAAAAGTGC AAGATATTAC TAGAAAAACC 1380
TGACTGCACA CACAATCCTA TCCCCTACGC AGGAGAAAGA CCGAGTGCTA GCACCCGGGG 1440
TGTGAAAGCC TGCACCAAGG GACCCAGGAA CCAGGCGTGC CTCCATTTCT CACTCGATTT 1500
GTTTACAATG AACGGACGGC GCCGGAGTCC CTCCGCCCTC AGCTCAGGCC CGGTTCCCAC 1560
CGCCCGACGC TGGCTGGCCG AGGCAGGGGC GCGGCGGGGG ATTTCGGGCA GGGCGGTGAA 1620
GCAGGGCCTG CTCTACAGGG GGCTTTTCTT CGCCGCGGTT TCTTCCCCTG TCGCTGCCCG 1680
GCCCCCACCT CCTCTCTCCT CCCGCGCGCG CTCTGCCCGC CGCCCACGCG CGGAAGCCCG 1740
CGGCCGGGGA GGGGGCGCCG TCTCCCGGCA TGCTCGGCGG CGGTGCCGGT CACGTGACGG 1800
GAAGGCGGCC GCCCCTGTCG CCTTCGCCAG CGCTAGCGGG CCCGCAGCAG AGGCAGTAGC 1860
GGGGCTTGAA ATGCTGACCT GCACCCCTGG CTTGCGCTCC CCCAGGCGGG AAAGACAAGG 1920
GGGCTGCTGT TGCTGCTTAC GAAAAGAATC TCAGCGCTGC TGGCCGCCAG CTTCCGGCTT 1980
GGGAGAAAGG ATGTGTTTCA GTCTGGGTTT CCTCATTTGC AAAATGGGTA TACTTTTTGT 2040
AGGGTTGAAC TGTAGGTCAG CAGGCTCCCA AATCCTGTCT TTCCTTGTCC CCCTCACCCC 2100
CAAGAGTAAC AACTTTTAAT TAATTTTGTT CAAGAGCTAA TAAAAAAAAA ATCTTCATTT 2160
CTTTGGATGA CACTGTGCCC AACTCCACGG TCAGCTTGCA GAGCGTAGCG GTTCTGCCCG 2220
AAACCCATCC GCCCAAGGCT TTTATTTTCC TAGATCTCAA ACAGTGGGAG GGTCGGACTC 2280
TAAATACTAT TTGTTTAGAC CCCTGAAAAT 2310