EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS094-03297 
Organism
Homo sapiens 
Tissue/cell
hMADS-3 
Coordinate
chr1:203291310-203295120 
Target genes
TF binding sites/motifs
Number: 12             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EBF1MA0154.3chr1:203294899-203294913AGTCCCTTGGGAAG-6.18
FOXP1MA0481.2chr1:203293410-203293422TTCTGTTTACCT-6.14
NFAT5MA0606.1chr1:203293739-203293749ATTTTCCATT+6.02
NFATC1MA0624.1chr1:203293739-203293749ATTTTCCATT+6.02
NFATC3MA0625.1chr1:203293739-203293749ATTTTCCATT+6.02
Nkx2-5(var.2)MA0503.1chr1:203294399-203294410AACCACTCAAG+6.32
ZNF263MA0528.1chr1:203294142-203294163GGAGAAGGATGAAAAGGAGGC+6.17
ZNF263MA0528.1chr1:203294986-203295007GGGGGTGGGGGAGGTAGGGGA+6.19
ZNF263MA0528.1chr1:203294534-203294555TCTCTCTCTCCACCCTCATCC-6.25
ZNF263MA0528.1chr1:203294588-203294609TCCTCCTCCCTCCCCACCCCT-6.31
ZNF263MA0528.1chr1:203294976-203294997GGTGGAGGATGGGGGTGGGGG+6.82
ZNF263MA0528.1chr1:203294979-203295000GGAGGATGGGGGTGGGGGAGG+7.21
Number of super-enhancer constituents: 64             
IDCoordinateTissue/cell
SE_02995chr1:203292164-203292573Bladder
SE_02995chr1:203293506-203295259Bladder
SE_03985chr1:203291109-203297800Brain_Anterior_Caudate
SE_04945chr1:203289338-203297990Brain_Cingulate_Gyrus
SE_05898chr1:203289669-203298247Brain_Hippocampus_Middle
SE_06796chr1:203291248-203297919Brain_Hippocampus_Middle_150
SE_09289chr1:203291619-203298025CD14
SE_10170chr1:203289119-203297915CD19_Primary
SE_10871chr1:203284966-203298704CD20
SE_11831chr1:203289035-203298012CD3
SE_13716chr1:203289038-203291878CD34_Primary_RO01536
SE_13716chr1:203292793-203293725CD34_Primary_RO01536
SE_13716chr1:203293742-203297798CD34_Primary_RO01536
SE_14427chr1:203288978-203298166CD4_Memory_Primary_7pool
SE_15408chr1:203292300-203294840CD4_Memory_Primary_8pool
SE_15911chr1:203292189-203297908CD4_Naive_Primary_7pool
SE_16309chr1:203292650-203294628CD4_Naive_Primary_8pool
SE_16865chr1:203291191-203292448CD4p_CD225int_CD127p_Tmem
SE_16865chr1:203292519-203295081CD4p_CD225int_CD127p_Tmem
SE_17312chr1:203288163-203298349CD4p_CD25-_CD45RAp_Naive
SE_17785chr1:203289099-203298642CD4p_CD25-_CD45ROp_Memory
SE_18348chr1:203288795-203298385CD4p_CD25-_Il17-_PMAstim_Th
SE_19143chr1:203291537-203297856CD4p_CD25-_Il17p_PMAstim_Th17
SE_19992chr1:203289235-203292376CD56
SE_19992chr1:203292693-203298152CD56
SE_20762chr1:203289154-203291712CD8_Memory_7pool
SE_20762chr1:203291967-203294973CD8_Memory_7pool
SE_21467chr1:203292376-203294760CD8_Naive_7pool
SE_21932chr1:203289195-203295058CD8_Naive_8pool
SE_22316chr1:203289029-203298361CD8_primiary
SE_24893chr1:203291596-203292097Colon_Crypt_3
SE_24893chr1:203292562-203293476Colon_Crypt_3
SE_24893chr1:203293709-203295361Colon_Crypt_3
SE_25439chr1:203287998-203298450DND41
SE_25807chr1:203291502-203298042Duodenum_Smooth_Muscle
SE_26687chr1:203291117-203297512Esophagus
SE_27668chr1:203291238-203298070Fetal_Intestine
SE_28606chr1:203289310-203298153Fetal_Intestine_Large
SE_29589chr1:203289136-203297695Fetal_Muscle
SE_30896chr1:203287761-203298586Fetal_Thymus
SE_31419chr1:203289018-203297546Gastric
SE_32519chr1:203292821-203297877GM12878
SE_37070chr1:203289243-203294889HSMMtube
SE_40823chr1:203291124-203297516Left_Ventricle
SE_41908chr1:203293695-203295300LNCaP
SE_42244chr1:203289109-203297636Lung
SE_43501chr1:203288039-203298141MM1S
SE_47697chr1:203291407-203293085Pancreas
SE_47697chr1:203294382-203294830Pancreas
SE_48633chr1:203291220-203297620Right_Atrium
SE_50070chr1:203288986-203298586Sigmoid_Colon
SE_51128chr1:203289260-203297849Skeletal_Muscle
SE_52362chr1:203289008-203297663Small_Intestine
SE_53333chr1:203291334-203297730Spleen
SE_55095chr1:203288068-203298519Thymus
SE_58291chr1:203236214-203310877Ly1
SE_58901chr1:203236169-203298087Ly3
SE_59628chr1:203236329-203298077Ly4
SE_60396chr1:203236100-203315897DHL6
SE_61013chr1:203236073-203298344HBL1
SE_61446chr1:203236043-203309894Toledo
SE_62225chr1:203236326-203298200Tonsil
SE_65315chr1:203293359-203295480Pancreatic_islets
SE_67145chr1:203288039-203298141MM1S
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 4             
ChromosomeStartEnd
chr1203293246203293605
chr1203292532203293800
chr1203293924203295000
chr1203294160203294623
Number: 1             
IDChromosomeStartEnd
GH01I203319chr1203288634203298409
Enhancer Sequence
TACCCTTAGA CTGTAGAGGA AGAAACAGGC TCAGAAGGTT AAGCAAAATT ACCTATGGGC 60
ACAGTGCTAG TAACTGGCAG TCAGGCTTGA ATCCAAGACT GACTGAATAA ACAAGAAAAA 120
TTATAGCAAA CAACCCAGGG TTTCTTATGT TTCTTCTTGT CACGCTTAGT GCTCTTGTCT 180
TCTGGATTCT AGGAACTTTT ACACAAAGCC ACAGTTCACT TTGCAGATAG CCTACATAAG 240
ATAAGCAGTC TGACATCCCA GTCTTACACA TCTCTTATGC CCAAGCTCAG ATCACCTCTC 300
CTCTGTGAAA TCATTGCCAT TCATCCTAAT GTTAGGTGAT GTTTTAAAAA CCTGCTGAGT 360
TCTTACAGCA AGAAGCCACT GCTCCCTCCC ACTGTGTGTC TTCCATGGGT TTCTTTTTTG 420
TGTATATGTC ATATTTCAAT TTAAATATAA GGTCCTAGAG ATCACCTCTG ATGTTGCCCA 480
ACATTCACAC AGCATCTGCA TCTAACACAG TACCTGGACA TGAAGCTGAA GCAAGAGGGA 540
CTGAGGAGAC TAGATAGTCT AGATGCTTTA GGGAAGCCTC TCTTTTACCC TTTGTCTCAC 600
TCCAATTGGA GAAATCCCAG TTCAATACAG ACTGGCCAGC CAGATGGGTT GCTTCACCCT 660
AATCAGGAAT TTCAGCTGCT GACTTCCCAG CCCTGGTACA AAACACAGGA ACTCCTTGTG 720
TTCATTGTGA CCCACTTCCT TACTGGAGCC TGCTCAGGGT GGAGGCTTAG GTCTCAGTGG 780
CTTCTCTTGT TTTCACAAAA GGAAAATAAT CTCTGTCATA ATTACTGCTT GACCAATAGG 840
CTTCTCCTGT GACAACTCCC TGGGGGAAAG AAAATGGAGC ACTGACTGTT TCCTAGGATG 900
AAATTCAAAG ATATCCAGGG GGGTGGGCCA GGATGTAAAA GCACTTGTTG AGATTATGGT 960
GCTATTTGAA TGTGAGGGAT TGATGTGGAT CCATGCTGGC CTTGGAGTCC AGAGGTTGTT 1020
ATCTGGGTCT AGCATGGGGC CAGCTGCAGC TGGCAGCTTG AAACCCATTT TTATGGTTTT 1080
GAGTTTTCAG CCATCAGTCT GGCAGGCAAG TAATGAGTGT CCTGCAGTAA GTGCCCTCTT 1140
ATGGGCAGAG ACAGGTCCTT TCGAGAAGCA CAGGGAGAGA GGACAGCAGA GGAGAAAAAA 1200
CAGGGATGGG TCCACAGTGT GTTGCCAGTC CAAAGGAGGT GACAGGAAAA TTATATATCA 1260
AAGTACCTAA AACACTGACC ACATGGGATT GAATGCAAAC TAATGGAATT ACACAGCATG 1320
ATCTACATCA GTGCTGGGAT GTTAGGTACA CAAATGGAAA TGATCAGAGA TGGGTGAGGT 1380
TAGCCTGGGC AAGGATTGGG AAAGACAGAT GTTTTGAGAA ATGCCTTTGC AGCTAACATG 1440
TCTTTACTAC CTTATTTATG CCCAGGAGAA GACATTTCAA CCACTTCTGA GCACTGGCAC 1500
TTTGGCCAAC ACAAACAACA GGAGGTCAGG TGGGTGGGCA AAAGAGCAGG GCATGAGGCC 1560
AGTTAGGAGA GCGTCAAGTA CTGTTCCCTG TGTTCTCTGG GTAGCCACTT TCCTCCCCTG 1620
TGCTTCCCAT CCTCCCCTGA CACCAGCATC ACCAGCTCAG CCCTCTGCAG TGGCATTTAG 1680
CCTAGAAGAA CGCATGCCTG TGGCCTCAGA ATCGTAACTT TACTAAACCT TTGATTAAGA 1740
CATAGGGATG ATTCCCTTTT ATTCTGAATG TATTGACCTC AATAAATAAA CTCTTAGCAC 1800
CTTAACCCAG AGTTCCCCTT GAATCCTCCT AAGTCAGGCT AGATTGATGG AAGGCAGAGG 1860
GAGAAGGGAG ACAAAAATCT GAGATTCAGG AGGTTGCGGG GAGGGCACTA GCCTTAGCTC 1920
AGCCTCCACC CCTACTCTCT AAAAAAAGAT CTCTGCACAG CCTTAGACCT TTCTACTCTC 1980
AGTTGCCTCA CGAAATAATA GATGTGAAGT ACTTTGAACT ACGTTTAAAG TGCTGTGCCC 2040
ACTCCACTTC CTGGGAGATG TGGGTGTGGG AAACTTGAGA GGAGAGCCTT GCGCAGCTTC 2100
TTCTGTTTAC CTGGTGTTGG ACCGAGCATC AGCTTGCTCT CTACCACACT AGGAGGTAGG 2160
GCGGTGGGGG TTTTTAACTC CCCAATTTAC AGAGAGGAAA CTAGAACTTG AACAACCCAG 2220
ATGACTTGCC CAGAATTACA CAACACGCAG ACAGTGAGCT GAGACTGGAA GCTGAGTTTT 2280
CTGACTCCTG GCCCACTCCT AGCTTCTTAA TGTTTGCGGG AATGTGGGAA TGATTTTAAC 2340
AGAATCCCAT TCTGGAACAA CTCAAACTTT ATCATTTAAC TGCAGAGCAC CCAGATCCCA 2400
CTATTCCCCA CCTGTCCCAG AGGCCTTGGA TTTTCCATTT AAACCCATTT CTGAAGAGGC 2460
AAAACGATGC GGGTCAAGGG ATGTTTGCCT GATGAAAGCC TCAAAGTACA AAGTCCCAAA 2520
GTACTGCAGC TTAGTGCTGC TGCCCCAAAC TGAAGTCTTC CTTCCCAGGG GCCCTGGCTC 2580
TGCGCAGAGC TGGTCAGAAG CCCAGGAGGA GCGTGGGGGC AGAGCTTCCC CAAAGGAGGA 2640
CAGATGGGCA GGCTGGCCTC AGTACCCGTG CTTTCAACAA ACTTTTGTTT TCCAGCCAAA 2700
CATGCAGTGT CAGTTCCCCT CTCACCTCCC GCTCCCTGGC AGCCCACCCT CTAGCCCCCA 2760
TTCTGCCTTC GGGTTGGCCC TGAGGAGCCG ATGGGCTGTA GAGGGACTGG GGTCTTTCTC 2820
CTTTATGACT TGGGAGAAGG ATGAAAAGGA GGCTTGCAAC TGGTGTGGGG CAACTGTTGC 2880
CATCTGTCTG GTGGGATGTC ACCAGGGAAG GTCTCGCCCA TTCACTCCTT CATGCACCGC 2940
TGGGCTTGGG CCTTTTGTTT GGTTGGCTGG GGAGGGGGGC TGCTGTAGTG GAGGGAGGCC 3000
GTGGGTGAGA GAAGCAGCTT CTTTGTGTCT GGACCAAACT TTCAGTGACT CACCAGGTTA 3060
ATTTGCATGA GGATGCTGCC CAAACCCCAA ACCACTCAAG TGATTGACAC CCCCTTCCCA 3120
CTTCACAACC TCTCCCCGCC TCCTTTGGTC ACACAGCTCC CCAGAGTCGG AGGGAGATGC 3180
TCTGGCTCCT GCACTGGGAT GAGGAGCAGG CCAAACCTCT GGGTTCTCTC TCTCCACCCT 3240
CATCCCTGTC CCTTTCCCAG TGTAAGGTGG ATCTGGTGTC CTCCTCCCTC CCCACCCCTA 3300
GCCTGGAAGA GCTGACATCC AAAGTCCTGC TTCCTCCTTA CAGCTCTTTT TGTTTGTTTT 3360
TTCGGTGCAC TGGGCCTGGC AGGCGAGGGG CCAAAGCCGG AGAAAAGACC CAATAGCCAC 3420
CGCCCAGCAG CTGAGCAGGA AAAGAAAGGA ACTGAATAGA GGCGGTGGGG TTGGCAGCCC 3480
TCCAGTCCAG CTTCTGGTCT TTGAATAAAC ACCCCAGCCA GGGGCTGGGG ATCAGTGTGG 3540
GGAGGCTTTG GGGCATTTAA TTATTTAAAG GTCTCAATTG GATGAGCTAA GTCCCTTGGG 3600
AAGGGGGAGG ACAGGCAGAT GGTGTGCCCC AGGAGCTGGG AAACGGGTGC AGGGTGCAGC 3660
GGGGATGGTG GAGGATGGGG GTGGGGGAGG TAGGGGAGAC TACACCAGAG GCAGGGCTCA 3720
GAGAGTAAGA ACATGGCGGA ATGGGAAGTG AAACCGCGGA CTGCCCTCCC GACCCAAGCA 3780
GCGCCCTGAA AATAGCCTTT CCCAACACCA 3810