EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-02010

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:109967700-109968920

Target genes

Number: 27
Name	Ensembl ID

RP11	ENSG00000244716
WDR47	ENSG00000085433
RANP5	ENSG00000228054
TAF13	ENSG00000197780
TMEM167B	ENSG00000215717
SCARNA2	ENSG00000238881
RP5	ENSG00000251484
KIAA1324	ENSG00000116299
C1orf194	ENSG00000179902
SARS	ENSG00000031698
PSRC1	ENSG00000134222
SORT1	ENSG00000134243
PSMA5	ENSG00000143106
SYPL2	ENSG00000143028
ATXN7L2	ENSG00000162650
CYB561D1	ENSG00000174151
AMIGO1	ENSG00000181754
GPR61	ENSG00000156097
GNAI3	ENSG00000065135
GNAT2	ENSG00000134183
AMPD2	ENSG00000116337
GSTM4	ENSG00000168765
GSTM2	ENSG00000213366
GSTM1	ENSG00000134184
AC000032.2	ENSG00000260246
GSTM3	ENSG00000134202
AHCYL1	ENSG00000168710

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr1:109968717-109968728	GGGTGACTCAG	+	6.02
IRF1	MA0050.2	chr1:109968238-109968259	AAACAGAAACTGAAAGTAAAA	-	9.95
JUNB	MA0490.1	chr1:109968717-109968728	GGGTGACTCAG	+	6.02
Nkx2-5(var.2)	MA0503.1	chr1:109967782-109967793	AAGCACTCAAG	+	6.02
REST	MA0138.2	chr1:109967750-109967771	ACCAGCACCTAGAACAGTGCC	+	6.46

Enhancer Sequence

AGAGTCTCCT ATATGCGAGC AAGGAGCTTG ATTTTGTCCA TTGCTGTAGC ACCAGCACCT 60
AGAACAGTGC CTTGTTCACA GCAAGCACTC AAGCACATTA ACTAAGAGAA TAAAAAGGGA 120
TGTATTTTAG GCCGTCTTGG GAAGACAGAA AAATAAGTAA CAAAGCAGTC AATACATATG 180
TTAAGTAAAT GGCCACAAAA TTTAATAAAT GCCTTCTGAT AAGCATAACA ATTTCTATCA 240
TACACACCCT AACTCAAAAT TATGTCACCC GAAGATGATT CTCTTCAATG TTCTGGAAGT 300
TAAATATCGA CCAACAAAGT CACTTTATAG GACAGTGGGG AAATATGTCA AAACTTCACA 360
CACATCTTCT ACGAGTCAGT AAAAAAGATG AAAAAGTGGT AACTGCAGGT GGTAAAACTT 420
CGACAGGATC AGCATATACT TGACAGGAAA TGCAGCATCT CATACCACTC AGTACAAAGA 480
AAATGTCTGC CTTCCCTGAC TTTAAAAAAG AGTAGCTATG TAAAAACTTA ACTGACGAAA 540
ACAGAAACTG AAAGTAAAAA TGTCTACAGC ATATATATGT ACAACTTAAT ATTGTGAACA 600
TTTTCATACC ACAAAAGTTT TTTAAAACTT GCTTTAAACT TTTAAAAAGT CAGAAAAAAT 660
TTTGGTCAAT TGGAATCGGC ATGATGAGAA ATCTCTTGAA AACCATTCTA AATTCCAGTT 720
CCTATAAAAT CAGACTCCAG ACAATATATC CAGCCAAAGC TACGACTGCC TTCGCGCTTC 780
TGAAGAAACT ATACACCGCA GCATGCCCTA CTACAAACCA GTTGCTTTTT CTTCCAGGAA 840
GCACGTTTAA CTTTTTGTTT GTTTGTTCAA GGCAGTCATA CTAGGCACGA AAAGATGAAC 900
GGAGCAAAGA GTGACCCTTG GCCTTCTCCG GGTTCAAGGT AGGAGTTCCG GCTCCTCACG 960
CCTTCTTTAC CAAGCACCAG CCGGAGCTTC TCGCTTCCGC ACCGAGTTAG GACCCAGGGG 1020
TGACTCAGCG GTAGGACAAG TGCCGCCGAT GTGGTCTAGC TTGGGGAAGG ACGGCGGGCG 1080
CCTGAGGAGG GCATAACATC CCCAGGTCCG GCCAGTCTCG GGTTCCTGGG GAGCCCCATG 1140
ACACGGCAGA ACCCAGGCCG CGCGGCCAGG TCCCGGGCCT GCCCACCCAT AATTCCCACC 1200
CGACGTCCCC CAGCTGCACG 1220