EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-01915

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:100787780-100789710

Target genes

Number: 14
Name	Ensembl ID

SLC35A3	ENSG00000117620
U6	ENSG00000212248
HIAT1	ENSG00000156875
SASS6	ENSG00000156876
CCDC76	ENSG00000122435
LRRC39	ENSG00000122477
BRI3P1	ENSG00000225169
RP11	ENSG00000230287
DBT	ENSG00000137992
RTCD1	ENSG00000137996
RP5	ENSG00000215871
CDC14A	ENSG00000079335
BCAS2P2	ENSG00000234332
VCAM1	ENSG00000162692

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

POU2F2	MA0507.1	chr1:100788162-100788175	GTATGCAAATGAA	-	6.21
Pou2f3	MA0627.1	chr1:100788160-100788176	TAGTATGCAAATGAAC	+	7.33

GeneHancer

Number: 3
ID	Chromosome	Start	End

GH01I100322	chr1	100788381	100788530
GH01I100324	chr1	100788541	100788750
GH01I100323	chr1	100788908	100789357

Enhancer Sequence

AAGTGATCCT CCCACCTTAG CCTCCTGAAA AGGGATTCTG TGTTTTTATC AGGAATCCTA 60
AAAATCAGAA AGCCCTCAAA ACTAAAAAAA AAAAAAAAAA AGACTCTAAT TATGAGCTTT 120
CTAATGCTTA TGTCTTTTAC ATTATGCTGT TTGACTAATC ACTAATGCTG ATCCTGCCTC 180
TTGTTTTACA ATGTTATTTA TATAATATGC AATTGAGTTA GTTTTATTTA ATTTTCATTC 240
ATACCATTCC TCATTTTGTA ATGTATTTAT GGTGACTTAA AATAAACACA GACCATAAAA 300
TGGTAAACTA CAAATAAAGA GTTAAAAATC AGGCCCAGAG AAATAAAAAC TAGAGTAGAA 360
ATCATGACCA GGCATAAAAG TAGTATGCAA ATGAACTACT AGAATTGAGT TTCAAGTTTG 420
GCCTAGGATT TCTAGTGAAA GTAAAAAGAG AGACATGATA TGTTACTGGC TATTCTCCCC 480
TTGACTTCCC TTCCAATACC TCCCAAACCC TCCCCTCCCC AAGCCTTCTA TTTCCTTAGT 540
GGAGTATGTA GCTTTTCCTA ACACTATGCC CTAGAAGAAA TTTCTCACAT GGCGCTATAA 600
GCTTATATTA TCATCACTAA TTCCACCTAT CTTTGCATAA TAAAGGGCAC AAAGCCAAAA 660
AGAAAGTTGT AGTTGAATCA AAATTGAGCT AATGGTTAAC TTGTGCACTG AGTATGTAGG 720
AAACAGTGAG TGTAAATGAC AAGACTAAAG AGAGTTGTAT ATTTGTTTAG CAATTTGTAT 780
CTCAGTAGCA AATAACTAGG GATTTAAGAA TCCTCATTTG TGTGCTTTGG AAATATCATG 840
CAATCACCTA GTAAAATTGC ATCATTTTTT GGTTCATATG AAAATATTTG AAGTGATGTT 900
CACTTGGTAA TTCTGTTTGC TGAACTTTGT GATTCATGTA TTATTTCATT ATTAAGTTGC 960
TCTGCTCTCT ACATAACTAA ATATCTTCAT TTAATGGGCC ACTGGGGAAA TAATAGTAGT 1020
TTCGAAGGAA AAGTTTTGTT CAGAATGTTT ATCATGAACT TGGATGAAGA GAGAGTATAT 1080
TGGTTAAAAC AGTAATAAAC ATGAAGTTAG CAGGGTTAAT TCAAACAATA AATGACAGAC 1140
TCTGGGTCTC ATTCCATCTT GGGCCCTGTA AATGAACACA TCACAGAGGA TCTGAAACAT 1200
GCTAAAATCC AGTCAAATGC CTGTCTGTGG GTTTTTTATG GGCCACTTTC TATTCTAATC 1260
CTCTGTTCTT TGCCTGCTCT ATGACTCCCC TGGATCTGCC CCTCTCATAT CAGGATTAAC 1320
TGCAGGCATT CTTTCTTACT GACCTATTTG GACCTACTTC TCCAGCTAGG TCCTTGGCAC 1380
TGTATCCTGG AGATAATCCA TGGTCAGCCT TTGGCTCCAC ACCCTGAAGC TTTGTGGAAT 1440
GGGTGCTCCT GCCTTCCCTT GCTCCTGAGA GCTTGACTCA GCTTGGCCTA GTTGGCCATG 1500
GTTCCTCACA GTATGTGAGT GTATGGGAGT GTGAGCAGTC TTTATCTCCT TTGTGTATTG 1560
CCTGGAGTCT AAGAGGGAGG AAACTGAAAC GCTGCTCAGA GTTGTTTATT TATTTATTTT 1620
GAGATAGGGT CTCACTCTGT TGTCCAGGCT AGAGTGCAGT GGTATGACTG AAGCTCACTG 1680
CAACCTTGAC CTCCTAGGCT TAAGCAATCC TCCCGCCTCA GCAGCCAGCT TATGCCATCA 1740
CACCCGACTT ATTTATTTAT TTATTTATTT TATAGAGACA GGGGCTCCCG ATGTTGCCTA 1800
GGCTGGTCTT GAACTCCTGA GCTCAAGCGA TTCTTCTACC TTGGCCTCCG AAAGTGCTGG 1860
GATTACAGGC CTAAGCCCCT GTGCCAGCCC AGAGTTGTTT AACAAAACAA AACAAAAAAA 1920
ACTTAAAGGT 1930