EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-01650

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:87717020-87718860

Target genes

Number: 4
Name	Ensembl ID

SH3GLB1	ENSG00000097033
RP4	ENSG00000230721
HS2ST1	ENSG00000153936
RP11	ENSG00000235251

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr1:87718123-87718135	GCTATAAATAGC	+	6.32
MEF2B	MA0660.1	chr1:87718123-87718135	GCTATAAATAGC	+	7.22
NEUROG2	MA0669.1	chr1:87717274-87717284	AACATATGTC	+	6.02
ZNF263	MA0528.1	chr1:87718262-87718283	AAAGGAAGGGGATGAAGAGGA	+	6.27

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I087251

chr1

87717681

87718485

Enhancer Sequence

ACCTAAGTGG GTGCCTGGTT CATTTGATGC TTAATGAATT AAATTGGCAA GAACAGATGA 60
TACTTGTCAA TGGATGTATC TATATAAAGA AACTCCACTT TTCCATGACA GTGGGACAAT 120
CAATTCTTTC TCCTCTCTCT GTCTCATGAG ATATACACAA GAAACAGAAA ATTGAAAATT 180
ATAGGGAATT TTTTTACAGT TCTACACATG ATGTTGCTGG AATTCACTGG AATTTAATCA 240
AAATAATATA CTACAACATA TGTCAACTCA ACTTCTGTGG TTGTTAAAGG AAAAGTTTAT 300
CTCCAAGTGA GACAAAGTGC ATTTGGAAAT ATGCAGTGGT GTTTTATTAT AATCTACTAG 360
TTCTCATCTC AGTTAAGTCA CTCCATGGAG TTGGGTAATC TACTTTCTTC CAGCTATAAA 420
GTCTAATCTA TTACAAGTCA TTGAATGTTA GAAATAGGTC AAGTCATGTC CAGGAATATG 480
GCTGGAACAT TGGAAAAATA GAATACACAG GAGGTGAGCT GGAATGGGAG GATATGGAAA 540
GAGAAATAAA ATAAGGACAC ATGGAGGACA GAAAAAAATA GGAGCCAAAA AGGATCCTTC 600
AGTGGAGAAT AATACAGCTT CATTTCTATT TCCTTTGATA TTTATGATCG ATCAAGCCTA 660
CATTTCTTCA TACTGAGGAA GGAAGATGTG ACTTAAGACA ATAAAAGTTG CAAGTTGGCC 720
TTTGAGTAAT GGGAAAAGTA TATCACATAA TTCTGTGTGA GACCAGTTCT TAGTTTTTTT 780
CTGAGTCCAT AGAATCACTT TAATAATCTG ATGAAAGCTA ATGAATCTTT CCCCCACAAA 840
GTGCACAAAC ATCTAAAATT TGGCCTGTGA TTTTATTTTG AAGGTTCACA GACTCCTGCA 900
GCCCCTCAAT TAATTCTGTG CAAGACTACT TCTGGTAGCT AAGTTTTCTG TGTCCCTTAC 960
ATCTTATATT GGAATTGAGC TTTCAGTTGC CGTTTACCCC AGAGAAGACA AGATACAAGT 1020
GCTCCCATCT GTGGGTAGGG GTTATCTGGT GTCTATGTTC TACATTTTTG GTGCAAGCAG 1080
TTGGCCTTCC AGAAATGGGA ATAGCTATAA ATAGCAAATG TTTGGCTGAG ACAATCTGAA 1140
GCAGTTTTCT CCAAATGCTC TGTGGGCAAC ATGAATGAGG GAACCAAACC AGACACAAAT 1200
GGTTTACGTA AGTCTGTCAA GGGCAACAAG GGGGTTAGTG GTAAAGGAAG GGGATGAAGA 1260
GGACACGCAT GAGTGCATGA TGCCTCAGAG CCAACATGTG GCAATGTTAC TGGATGATGT 1320
GGCACATCTG TTTGCAAGCT GTGTATGCTT CAGAATTGAG CAAATAGGTG TAGCAAAAGG 1380
TCAAGAACAG CAAATAGAAT CCATCTTCCT TACCAATTCC AGTAGTCTGT ATTGCAGTCT 1440
GCTATATCAA TTTCCCCCAG TGGATCAACT CTCCTGGTAT TGACACCATT GTGTAACCAC 1500
CTCCCCTTGA AGCTGGGCTG TTCCTCTGAT TTGCTTTAAC CAGTAGAAGG TGGAAGAAGT 1560
GGAGTTGTGC CAGTTCTGGC CTAAACCTTA AGAGGTCCTG GAAGTCTGCT TTCTGCTCTT 1620
GGGAGCCCTG AGCTGCCACA GAAGAAATCT GTTTGCTGTG CTACAGCGAC CATGTGGAGA 1680
GGCCATGTGG AGAGGGAGGG AACCTGCGAC TCCATGAAGG AGAACTGAAG ATCCAGCCAC 1740
CAATGAGAAC TGAGGATCCA GACACAGGAC CACAGGCAAG TCATTCCAGC CACTGCCTAG 1800
CCCTTTGAGC CATCTCACCT GAAGCACCAT CAGACATGTA 1840