EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-01616

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:85929100-85930420

Target genes

Number: 9
Name	Ensembl ID

MCOLN3	ENSG00000055732
SYDE2	ENSG00000097096
C1orf52	ENSG00000162642
Y	ENSG00000223254
RP11	ENSG00000223653
BCL10	ENSG00000142867
DDAH1	ENSG00000153904
CYR61	ENSG00000142871
ZNHIT6	ENSG00000117174

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ALX3	MA0634.1	chr1:85929738-85929748	TCTAATTAAA	+	6.02
TCF7L2	MA0523.1	chr1:85929196-85929210	AGACATCAAAGGGC	+	6.22
ZEB1	MA0103.3	chr1:85930173-85930184	CCCACCTGCCC	+	6.14

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_45583

chr1:85928272-85932264

Osteoblasts

Enhancer Sequence

TAGAACGCAT TAGAAAGTAT TCAAATGGGA TTACATTCCT TATCAGTTTA AAAGAGTGGG 60
ACATCTCACA GACTCAAAGA TGGAGAGGTG TGGCAAAGAC ATCAAAGGGC TAGCAGAGAT 120
CTGTTACTCT TTTGGTTTTC TGTTAATGGA GGGTGAAATA AAAGCTGATT ATCTCGATGA 180
GAAATTAGTA GAATATGCTT ATTTTCTCAG ACCATGTGGC ATTCCATCAA CCAAGTAGTG 240
GAGCAGGTGA GGAATAAGCA TATTTTATCA TAAGCTCTAT GAGGCATTTC CAATGTGAAG 300
TGAATACAGA CAAAATAGAA AAAAAATTCT TAAATCTCCA GAAATGAAAG AAACCACTAG 360
CTTCTTGCAA TGCCACTGGA TGCCAATAGC AACGGAGTCT TGAGCCTGGG CTCTTAACTG 420
GCAATGAGAA GAATCCCAGG CCAGATGGCA TTTTAAAATC CAATCTCACT CTATTTGTCT 480
CTCCCCACTA ACCTACATTG CACTTAAAGC AATCAGCCAT TTCACAAGCT GCAGTATTTC 540
AAAGTAGTTA CAACCCTTGA GAACAGAAAA ACTCTCTTAA TTGCTGTGAG TTTAAAAATA 600
TAGAGAATAA AAATTATGGA ATTTGTGAAA CAACCATCTC TAATTAAACA CGCTCGCTAG 660
CACACACACC CAACACCGCA CAGAGTACAG CTTTTCAAAC CTAGCCCATT CATGCACACA 720
TTTAGCACAG CTCACCAACA AAACACTTTT CCTTCCATTC ATTCACTTAC TAGTCCCGTT 780
CTTTGGGACT CACTCGCCAC CACTGAAAAC TAACTTGAGA AGCCCCAGGT CTGTGGGCAC 840
CGACACCCCG TTAATTCATC CAGCTTGTCC TGCTCCGAGC GCCAGGCAGG ACTTGGGGGC 900
TTCGGTGTCA CGACTGGCGC TGCCCCCTGG AGGGACGCCC AGCCTCCACC CGCCCTACCG 960
GAGCGGCACC CCTCGCGGCC CTCGCTCCCT GGGAAACACT CAGAGTTGCA CTGTCGTCGC 1020
TGCCGTTTAA TTTTCACAAA TAAAAATGCC CGTGAGACGG AATCCCCCGC CCACCCACCT 1080
GCCCGAGACC GTACAACCAC ATTGAATCGG ATCCTCCAGA AGGCTGCCGG CAGCCGGGAG 1140
GTGTGAACAA TGAACTTCTC TCTGACTCTC TGACACACAC ACACACACAC ACACTCGCCC 1200
CCCGACGGGA AGTTGTGAAC TACTAGCCCG AGGGCCAATG GCGCGACTCC CCAGGCAACA 1260
CGGCGGCCGG CGGCGGGGGA GGGCCTGGCG CGCGCCCCGG CCGCGCCCCT CGAGTCGGCA 1320