EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-01343

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:68029500-68030870

Target genes

Number: 4
Name	Ensembl ID

U6	ENSG00000253074
RP4	ENSG00000228523
RP11	ENSG00000232284
GNG12	ENSG00000172380

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr1:68030421-68030432	TTTTATGGCTC	-	6.14
EWSR1-FLI1	MA0149.1	chr1:68030770-68030788	CTTTCCTTCCTCCTTTTC	-	6.42
KLF4	MA0039.3	chr1:68029842-68029853	GCAGGGTGTGG	-	6.62
ZNF263	MA0528.1	chr1:68030778-68030799	CCTCCTTTTCCCCCATCCACC	-	6

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I067563

chr1

68029406

68030594

Enhancer Sequence

TATTCATTTT CATACCCCAA GCACCTAGCA GAGTGCCTGA TACAGGTAAG GCACTCAGTA 60
TACATTTGAT GAATAAGTGA CTGACTCACT GAATGAATGA ATGAATGAAT ATTTCAGCCT 120
CTCATCAATT CAAACCTGAC TTAATCAACT CTGAAGAGAA GAGATTACAT GAAAACATGT 180
AACGTCAGGC AGCAAGCCTA TCGTGTCTAT CACTGGGTAC TGATTATTGT GTGCTAGCTG 240
CTAGGTGCTG GCCATGGCTA GGAGTAGGTT AGGAGGTGAT GCCTGTCCTC AAGGCATATT 300
CTGTAAGGGG AGGTTAGGCC TTGTGGGGCA GGGAGTAAGC AGGCAGGGTG TGGAATCAAA 360
TGGTCTAGGT TCAAACCCCT GTTCCTGCAT TTAGTAGCTG TGTGGTCCTG GGTGGTTTTC 420
TAACCACACT GGAAACTATG GGAGATATGA AAATAAAGCA GAAACGGACG CTGCCGTGTG 480
AAGTAGAAAC CCAAGAGAAG AAATTGGTTA AACGTGGCAT ATGACGAGTT TTGCTTTCAT 540
TGTTTTGCTC TCTACAAGAT TTATTTCCTG TCATGAAAAC TCCACCCATG CCCTAGTTGG 600
AAATCACCAG TGAAAAGGAC GGGAAACTGG GCTGTCCTGA CGTGAGCAGC TGGGATCCCA 660
CTAGGTCACG AGCTTGGGAA AGGAGGAAGA AGGAGATGTT GTGTCTGGAG TCATGAGGAA 720
GTGGGCTCCT CCTGGACCTG CTGGATTCTG CCAGGGCCAG AGCACCTTTT GGGTGTGGGA 780
GGTCAGCCAG ATGATTGTTG CTAATGCTCA CGGGCTCACA GGGGGCTGAC TCGGCCCCAG 840
CAAGTAAATC ACTTTTTTAA GTGCTTTACT TGCTGCAGAT CATTTAGTGT CCACAACCTC 900
TGCATGAAGC CATCATTCTC TTTTTATGGC TCCCATTTTA TTGGTGCTGA CACTGAGGCC 960
TAAAGTTAAA GAACTCATCC AAGGTCACAC AGCTAGTAAG TGGCAGGACC AGGATTCAAC 1020
ATAGGTTGTC TGGCTCAGAG TGTGTGCACT TAAACACTAC CTAACTCCCC CTTGCAAGTG 1080
GGATGCAGCC TGGTTTTGCA GGAAAAGCAC CCACTTCAGA ATCAGGCAGA GAGGGGGATC 1140
TGATCTGGCC TTGCAACCCT GGATATGGCA CTTAACCTTC CTGATCTGTA ATGTGGAAAT 1200
CATAAGAGGG CTGTTGTGAG GACTAAATGA GACAATATAG TAGCCATTTT CCTTTTCCTT 1260
CCTTCTTAGT CTTTCCTTCC TCCTTTTCCC CCATCCACCT GTTCCCCTGT TGAACTTTCA 1320
TATTTCACCT TTGTTTCTCA AAGCTAGTGA AGAAAGCGAA GAGCTTCCAG 1370