EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00595

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:29492710-29493140

Target genes

Number: 18
Name	Ensembl ID

SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
snoU13	ENSG00000238821
SNORD99	ENSG00000221539
SNORA61	ENSG00000207311
SNORA44	ENSG00000207314
SNORA16A	ENSG00000207070
TAF12	ENSG00000120656
RNU11	ENSG00000209804
YTHDF2	ENSG00000198492
EPB41	ENSG00000159023
RP4	ENSG00000225616
TMEM200B	ENSG00000253304
RP11	ENSG00000225750
SRSF4	ENSG00000116350
MECR	ENSG00000116353
PTPRU	ENSG00000060656

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_00764	chr1:29491299-29494051	Adipose_Nuclei
SE_28354	chr1:29490492-29494058	Fetal_Intestine
SE_29089	chr1:29488095-29494248	Fetal_Intestine_Large

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I029163

chr1

29490426

29494007

Enhancer Sequence

ACAGGAATCA AACAGCTTTG TTTCAAAGCA CTCAGTGATG TCCTATGCTT CAGCCAACTT 60
GGTCTTATGA GGTAAAAAGT CAGGACACAC TGATAGGACA GTACTAAAAA AACGGTAATT 120
CTTGCTGTCT GCATAAAGTG CTTGGCAAAC TGTAGAAAGA CACTTCTGCA ACCAACTCTA 180
GTGCTCAGAA GAGGCCAACT CAGAGAAAAG CTTGTGAATG AGAACAGTGT AACTGCCCCG 240
ATTCCAAAGG TCTGCAACAT TCCAGGGAAC CAGCGTTCAG GCCCTCACAG AAGAATTAAC 300
CAATGTCACA TTTACTGCTC AGGATCAGTG ATTATGGTTG CAATTTGACT TTCCTGGCAA 360
CAGAGGGTTG TTTACAACCC ACAACTAAAA GCTGCTACCA CATGAAATGG GTTCCTGAGA 420
TCCTTTCCTT 430