EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00478

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:25761950-25762270

Target genes

Number: 14
Name	Ensembl ID

RP4	ENSG00000233419
SYF2	ENSG00000117614
RP3	ENSG00000261349
RHD	ENSG00000187010
SDHDP6	ENSG00000224183
RP11	ENSG00000259984
TMEM50A	ENSG00000183726
C1orf63	ENSG00000117616
snoU13	ENSG00000238889
SDHDP1	ENSG00000238084
RHCE	ENSG00000188672
TMEM57	ENSG00000204178
LDLRAP1	ENSG00000157978
MAN1C1	ENSG00000117643

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_13750	chr1:25754661-25763348	CD34_Primary_RO01536
SE_14572	chr1:25754450-25763694	CD4_Memory_Primary_7pool
SE_20863	chr1:25754497-25762981	CD8_Memory_7pool

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I025434

chr1

25760724

25763118

Enhancer Sequence

CCAATTTCCT TTTTCAGACC CTTGTCTACA TCTGATCTCC AGAGGTTTCA TTTGACTGCT 60
TTTTCTGCCT CCTTAATGAT GTTTTCTAAG CCTAGTTTTA GACTCCTTTG GGCTATGCTT 120
ATTAAAGTCA CTGCAGGCTG TCATGACCCT TGGCTGCCTT GATTGTACAT GTGTTCTGCA 180
ACTGAAACCC CAGATACCTG TGTTGCAATC TCATAGCCTA AAAGCATTTT GGTAATCTTG 240
GTAGGCTTTA ACTTTAACAA TCCTGGACCT GGCACGAAAG TGATAGATTC TGTATTGTTT 300
TAGAGGAGTG TTGGGGAAGG 320